Serratia ficaria: SAMEA4384070_0893
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Entry
SAMEA4384070_0893 CDS
T06444
Symbol
ffh
Name
(GenBank) p48
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sfj
Serratia ficaria
Pathway
sfj02024
Quorum sensing
sfj03060
Protein export
sfj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SAMEA4384070_0893 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SAMEA4384070_0893 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA4384070_0893 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfj02044
]
SAMEA4384070_0893 (ffh)
Enzymes [BR:
sfj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SAMEA4384070_0893 (ffh)
Secretion system [BR:
sfj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SAMEA4384070_0893 (ffh)
Eukaryotic Sec-SRP protein
SAMEA4384070_0893 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_31
AAA_30
AAA_33
KTI12
AAA_24
APS_kinase
AAA_14
Fe-ADH_2
YqeC
AAA_19
Helicase_RecD
AAA_16
ArsA_ATPase
TsaE
VirC1
Motif
Other DBs
NCBI-ProteinID:
SNV89322
UniProt:
A0A240B0T2
LinkDB
All DBs
Position
1:967960..969321
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKESAV
GHEVNKSLTPGQEFVKIVKSELIAAMGEVNTELNLAAQPPAVVLMAGLQGAGKTTSVAKL
GKFLKEKQKKKVLVVSADVYRPAAIRQLETLAEGVGIDFFPSDVKEKPIDIVNRALQQAR
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDIESKVDREQAEKLANKLKKGDGFDLTDFLEQLKQMRNMGGMASMLSKLPGAGQL
PDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAMGSGMQVQDVNRLLKQF
DEMQRMMKKMKKGGMAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatttaaccgatcgattgtcgcgcaccctgcgcaatatcagcggccgtggg
cggctgaccgaagagaatatcaaggaaaccctgcgtgaagtgcgcatggcgttgctggaa
gcggacgttgcgctgccggtggttcgcgacttcatcaaccgcgtcaaagaaagcgcggtt
ggccatgaagtcaacaagagcctgacgccggggcaggaattcgtcaaaatcgtcaagagc
gagctgattgccgcgatgggcgaagtgaacaccgagctgaacctggcggcccagccgccg
gcggtggtgctgatggcgggcctgcagggcgccggtaaaaccaccagcgtggcgaagctc
ggcaagttcctgaaagaaaaacagaagaaaaaagtgttggtggtgtcggcggacgtttac
cgcccggcggcgatccgccagctggagacgctggcggaaggcgtcggcatcgatttcttc
ccgtctgacgtcaaagaaaagccgatcgacatcgtcaaccgcgcgctgcagcaggccagg
ctgaagttctacgacgtgctgatcgtcgataccgccggccgcctgcacgttgacgaagcg
atgatggacgagatcaagcaggtgcacgcggcgatcaagccggtggaaaccctgtttgtg
gtcgacgccatgaccggccaggacgccgccaataccgcaaaagcctttaacgaagcgctg
ccgctgaccggcgtggtgctgaccaaggtcgacggcgacgcgcgcggcggcgccgcgctg
tccatccgccacatcaccggcaagccgatcaagttcctcggcgtgggagagaagaccgac
gcgctggagccgttccacccggaccgcgtggcatcgcgcatcctgggcatgggcgacgtg
ctgtcgctgattgaagatatcgaaagcaaagtcgaccgcgagcaggcggagaaactggcc
aacaagctgaagaagggcgacggtttcgacctgaccgacttcctcgagcagctgaagcag
atgcgcaacatgggcggcatggccagcatgttgagcaagctgcccggcgcgggccaactg
cctgacaacgtgaagtcgcagatggacgataaggtactggtgcgcatggaggccatcatc
aactcgatgacgctgaaagagcgcgccaagccggaaatcatcaaggggtcgcgcaagcgc
cgcatcgcgatgggttccggcatgcaggtgcaggacgtcaaccgcttgctgaagcagttt
gacgaaatgcaacgcatgatgaagaagatgaaaaaaggcggtatggcgaagatgatgcgc
ggcatgaagggtatgatgccgccgggcttcccgggccgctga
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