Serratia ficaria: SAMEA4384070_1075
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Entry
SAMEA4384070_1075 CDS
T06444
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfj03400
]
SAMEA4384070_1075 (sbcC)
DNA repair and recombination proteins [BR:
sfj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA4384070_1075 (sbcC)
Archaeal homologous recombinant proteins
SAMEA4384070_1075 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
nSTAND3
AAA_15
TsaE
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
SNV90847
UniProt:
A0A240B524
LinkDB
All DBs
Position
1:complement(1142835..1146086)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGIGYRAFWSQRRAKNAPDGNLQAPKVELALRED
GKILADKVRDKLELTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFERHKQAKADLDALHQRASGIELLNDEQRQRLATLQAELATEEQALSRQNQR
QQQALGWLQQWQRLRLQRDNSQRQLDGVQREQADAAPQLRQLARSEPAEQLRPLRNERDR
CRAELQTIQQQAALLTQQQERHSAQLTPLQQAVEKTRLAQQAHAERMRQQQRLIDEQVAP
LDHQIAQLQSTQAERRQAGDTAAQQCAQQRAALEQLSVQRGQLTTQGAQHQQRLNALTEA
LAVQQRQQQTLETQTPLAPLRQRLSALADLRPTRQQLFTLSSLSQQTVKRLEQQRQELHT
GQSELTRLEPQLELVRQQFKQQKTHQADVEKTYALEQRIVGLEAERARLQPDAPCPLCGS
CRHPAVEQYQEVKLSETAQRLEQMKIQTEALQKQGVELRARYDNLQQQLQRQQQAIAQDE
QQLAAQRQQWQQLSAPLAFDFALADGEQLSAWLNGCDDEERRGQQALQQHEQAAQAVQQA
KDALAALQTQQQQAQQQLALLEERFTLLQKTHADSLQQQQDLQQRWQEGEKTLAERRAQR
LALFGEQQVAQVREQLRAKQTTCEQASAQAAEQWQKAQELRERLAGQQAGLQQQHSQMQE
RLRQAEQHWLQALADSEFADEAAFSAALLDDALRRELQQRKERLQQRQVEAAALLAQAAQ
SLEQLLQNRPEGMDETVADADALNQALAALAQQLKALQLRQGEVRNQLESDAARRLNQQS
LFEQITQSQRQYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANNQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcggttaaagaacctcaactcattgcagggtgagtggaaaatc
gacttcaccgccgaacctttcgccagcaatgggttattcgccatcaccgggccgaccggc
gcgggcaagaccaccctgctggacgccatttgcctggcgctgtatcaccagacgccgcgc
ctcaacgtgaccccgagccagaacgaactgatgacccgccacaccgccgagtcgctggcg
gaggtggagtttgaggtgaaggggatcggctaccgcgccttctggagccagcgccgggcc
aaaaacgccccggacggcaacctgcaggcgccgaaggtcgagctggcgctgcgcgaggac
ggcaagatcctggcggacaaggtgcgcgacaagctggagctgaccgccgccatcaccggg
ctggatttcggccgcttcaccaagtcgatgatgctgtcccaggggcagttcgccgccttc
ctcaacgccgacgccaatgaccgcgccgagctgctggaagagctgaccggcaccgagatt
tacggccgcctgtcggagcaggtgttcgaacggcacaagcaggccaaggccgatctggat
gcgctgcaccagcgcgccagcggcatcgagctgctgaacgacgagcagcgccaacggttg
gcaaccctgcaggcggagctggcgacggaggagcaggcgctcagccggcagaatcagcgg
cagcaacaggcgctgggctggctgcagcagtggcagcgcctccggctgcagcgggataac
agccaacggcagctggacggcgtgcagcgcgaacaggccgacgccgccccgcagctgcgg
caattggcgcgcagcgaaccggccgaacagctgcgcccgctgcgcaacgaacgcgatcgc
tgccgtgccgagctgcagacgatacaacagcaggcagccctgctgacgcagcaacaggaa
cggcactcggcgcagctgacgccgctgcagcaggcggtggagaaaacccgcctggcgcag
caagcccatgccgaacggatgcggcaacagcaacgactgatcgatgagcaggtcgcgccg
ctcgatcaccagatagcccaactgcagtcgacgcaggccgagcggcggcaggccggcgat
accgccgcgcagcagtgcgcccagcagcgggcggcgctggagcagctcagcgtccagcgc
ggccagctgacgacgcagggggcgcagcatcagcagcgcctgaacgcgctgaccgaagcg
ctggccgttcaacaacggcagcagcaaacgctggagacgcaaacgccgctggccccgctg
cgccagcgcctgagcgccctggcggatctgcgcccgacgcgccagcagctgttcacgctc
tcttccttatcacagcaaaccgttaaacgactggaacagcagcggcaagagttgcacacc
ggtcaaagtgaactgacccggttggagccacagctggaactcgtccgtcagcaatttaag
cagcagaaaacccatcaggccgatgttgaaaaaacgtatgcgctggaacaacggatcgtt
ggtctggaagccgagcgcgcacgtttgcagcccgacgctccctgcccactgtgcggctcg
tgccggcatccggcggtagaacaatatcaagaggtaaagctgtcagaaactgcgcaacgt
ctggaacaaatgaaaatccagaccgaagcattgcaaaaacagggcgtcgaactgcgagcc
cgttacgacaacttgcaacagcaattgcagcgccagcaacaggctatcgcgcaggatgaa
cagcagctggccgcccaacggcaacagtggcagcagctcagcgcgccgttggcattcgac
tttgcgctggcggatggcgagcaactcagcgcctggctgaacggctgcgacgatgaagag
cggcgcgggcaacaggcgctgcagcagcatgaacaggcggcacaggcggtacaacaggcg
aaagacgcgctcgccgctctgcaaacgcaacagcagcaggcgcagcaacagctggcgctg
ctcgaagagcgctttacgctgctgcagaaaacccatgccgacagcctgcaacagcagcaa
gacctgcaacaacgctggcaagaaggcgagaaaaccctcgccgaacgtcgcgcacagcgg
ctggcgctgttcggcgaacagcaggtcgctcaggtgcgcgaacagctgcgcgccaaacaa
accacctgcgaacaggccagtgctcaggccgccgagcagtggcaaaaggcgcaggaactg
cgcgaacgcctggccggccagcaggccgggctgcaacaacagcacagccagatgcaggag
cggctgcgacaggcggaacagcactggctgcaggcgctggccgacagcgaattcgccgac
gaagccgcctttagcgccgcactgctggacgacgccctgcgccgcgaattgcagcagcgc
aaagagcggctgcaacagcggcaggtggaggccgccgcgctgttggcgcaggccgcgcag
tctctggagcagctgctgcaaaaccgccctgaagggatggatgaaaccgtcgccgacgcc
gacgccctcaaccaggcgctggccgcactggcgcagcagttgaaggcgctgcagctgcgg
caaggcgaggtgcgcaaccagctggagagcgatgccgcccgccgcctcaatcagcagtcg
ctgttcgagcaaatcacccagagccaacggcagtacgacgactggagctatctcaaccag
ctgatcggctccaaagagggcgacaaattccgccgcttcgcccaggggctgacgctcgat
catctggtttacctggccaataaccaactcggccggctgcacgggcgctacctgctgcaa
cgcaaaaccagcgacgcgctggagctgcaggtggtggatacctggcaggcggatgcgctg
cgcgacactcgcaccctgtccggcggcgagagcttcctggtcagcctggcgctggcgctg
gcgctgtccgacctggtgagccacaaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctggacgccgaaaccctcgataccgcgctggatgcgctggacagcctcaac
gcctccggcaagaccatcggcgtgatcagccacgtcgaagcgatgaaggagcgtattccg
gtgcaaatcaaggtgaaaaaggtcaacggcctcggcatcagccggctggagcctcagttc
cgactggaatag
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integrated database retrieval system
