Serratia ficaria: SAMEA4384070_1076
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Entry
SAMEA4384070_1076 CDS
T06444
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfj03400
]
SAMEA4384070_1076 (sbcD)
DNA repair and recombination proteins [BR:
sfj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA4384070_1076 (sbcD)
Archaeal homologous recombinant proteins
SAMEA4384070_1076 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
SNV90856
UniProt:
A0A240B775
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All DBs
Position
1:complement(1146083..1147315)
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AA seq
410 aa
AA seq
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MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLIERIEQQQVDALIVAGDLFDTGSPPSYAR
ELYNRFVVELRRTGCQLVVLGGNHDSVATLNESRELLSCLNATVIANAQSDIERQILVLN
QRDGQPGAVLCAIPFLRPRDLLTSRAGESGAQKQLALQEAIAEHYQALYRAACDRRDQLG
LPLPIVATGHLTTVGVTASDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQNVAKSEH
IRYSGSPIPLSFDELGKAKSVFMVDFAAGALQQVTPLEIPSFQPMRLIKGDLPQIEQQLR
QFADYQGELPVWLDIEVATQDYLSDIQRRIQLLADELPVEVVLLRRSKEQRRQAIEQQDK
ETLNELSVSEVFERRLAQEPEMAEARQQRMRQMFHQVVDEVRHPQREADQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacctctgactggcatcttggccagtactttttcaccaagagccgc
gccgccgagcatcaggctttcttgcgctggctgatcgaacggatcgaacaacagcaggtg
gatgcgctgatcgtcgccggcgacctgttcgataccggctccccgcccagctacgcccgc
gagctgtataaccgctttgtggtggagctgcggcgcaccggctgccagctggtggtgctg
ggcggcaaccacgactcggtggcgacgctgaacgaatcgcgcgagctgctttcctgcctg
aacgcgacggtgatcgccaacgcgcagagcgacatcgaacggcaaattctggtgctgaac
caacgcgacggccagccgggcgcggtgttgtgcgccatcccgttcctgcggccgcgcgac
ctgctcaccagccgcgccggcgaatccggcgcgcagaagcagctggcgctgcaggaagcg
atcgccgaacattatcaggcgctgtatcgggcggcctgcgaccgccgcgaccaactggga
ttgccgctgccgatcgtcgccaccggccacctgaccaccgtcggcgtcaccgcctccgac
tcggtgcgcgatatctacatcggcacgctggacgccttcccggcgcaggcgtttcccccc
gccgactacattgcgctgggccatattcatcgcgcgcaaaacgtcgccaagtcggagcat
attcgctacagcggctcgcctatcccgctcagcttcgatgaactgggcaaggccaaaagc
gtgttcatggtcgacttcgccgccggcgccctgcagcaggtgacgccgctggagatcccc
agcttccagcctatgcggctgatcaagggcgatttgccgcagatagagcaacaactgcgg
cagttcgccgattatcaaggcgaattgccggtatggctggatatcgaggtggcgacccag
gactacctcagcgacattcagcgccgcatccagctgctggcggatgagctgccggtggag
gtggtgctgctgcggcgcagcaaggagcagcgccgccaggcgatcgaacagcaggataag
gaaacgctcaacgagctgagcgtcagcgaagtgtttgaacggcggctggcgcaggagccg
gagatggccgaagcgcgtcagcagcggatgcgccagatgttccatcaggtggtcgatgag
gtgcggcatcctcaacgggaggcggaccaatga
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