Serratia ficaria: SAMEA4384070_1104
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Entry
SAMEA4384070_1104 CDS
T06444
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sfj
Serratia ficaria
Pathway
sfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMEA4384070_1104 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfj03400
]
SAMEA4384070_1104 (xseB)
Enzymes [BR:
sfj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SAMEA4384070_1104 (xseB)
DNA repair and recombination proteins [BR:
sfj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SAMEA4384070_1104 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TACC_C
DUF4164
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
SNV94469
UniProt:
A0A240BGC9
LinkDB
All DBs
Position
1:complement(1176954..1177217)
Genome browser
AA seq
87 aa
AA seq
DB search
MPKKPAQSDSTEQNVSFESSLSELESIVTRLESGELPLEDALNEFERGVQLARQGQQKLQ
QAEQRVQILLNDSAEDAPLAPFTPDAE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaaccagcacaatcagacagtacagagcaaaatgtcagctttgaaagctcc
ctcagcgaactggaaagcatcgtcacgcgtctggaatcaggtgaattgccgctggaagac
gcgctgaatgagttcgaacgcggcgtacagctggcgcgccagggccagcaaaagctgcag
caggcggagcaacgcgtgcaaattttacttaacgacagcgccgaagatgcccctctggcg
cctttcactccggatgccgagtaa
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