Serratia ficaria: SAMEA4384070_1510
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Entry
SAMEA4384070_1510 CDS
T06444
Symbol
lrpC
Name
(GenBank) HTH-type transcriptional regulator lrpC
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_1510 (lrpC)
03036 Chromosome and associated proteins [BR:
sfj03036
]
SAMEA4384070_1510 (lrpC)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
SAMEA4384070_1510 (lrpC)
Chromosome and associated proteins [BR:
sfj03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SAMEA4384070_1510 (lrpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR
DUF294_C
HTH_20
MarR_2
HTH_10
TrmB
HTH_5
Fe_dep_repress
CM_2
LexA_DNA_bind
BRICHOS
2OG-FeII_Oxy_2
HTH_36
Motif
Other DBs
NCBI-ProteinID:
SNV97130
UniProt:
A0A240BNM2
LinkDB
All DBs
Position
1:complement(1579815..1580249)
Genome browser
AA seq
144 aa
AA seq
DB search
MDDIDRQILTILAEEARASLKTLSAKAGLSSPSTAERLRRLEENGVIQGYTLNVNLQALG
YAFQSLVRIKPLPGMLKKVEQLIQALPEAIECDKVTGEDCFIVRLVAHSMEQLDQILDRL
AEHAQSNTSIVKTTPVKRRLPPLR
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatcgatcgccagatcctgaccattctggccgaagaagcgcgagcgtcgttg
aaaacgctgagcgccaaagcggggctgtcgtcacccagcactgccgagcggctgcggcgg
ctggaggaaaacggcgtgatccagggctataccctgaacgtcaatctgcaggcgctcggc
tatgcctttcagtcgctggtgcgcatcaagccgctgccgggcatgctgaagaaggtcgaa
cagctgatccaggcgcttcccgaggcgattgagtgcgacaaggtgaccggcgaagactgc
ttcatcgtgcgcctggtggcgcattcgatggagcagctcgaccagatcctcgatcggctg
gccgagcacgcgcagagcaatacctcgatagtgaagaccacgccggtgaagcgccgcctg
ccgccgctgcggtag
DBGET
integrated database retrieval system
