Serratia ficaria: SAMEA4384070_1525
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Entry
SAMEA4384070_1525 CDS
T06444
Symbol
mscS_1
Name
(GenBank) Small-conductance mechanosensitive channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfj02000
]
SAMEA4384070_1525 (mscS_1)
Transporters [BR:
sfj02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMEA4384070_1525 (mscS_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
SNV97194
UniProt:
A0A240BN92
LinkDB
All DBs
Position
1:complement(1595668..1597896)
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AA seq
742 aa
AA seq
DB search
MPPNACSRFSSHLRERLLPLLLLLLLSMCAAPPAQSAPTAPADRTEQQKASYAALADILQ
DDQARAELIAHLKQSAGESPADNASPPARPEAEQAPATLSDSLNGLAQEGIGSLNQKLHL
RQKLIDSGPKRVFQPDRFFRALGYFLLTVAVTFALFHLIRRLIAPLYKRMGSWGHNARLQ
NGPWYKRPAAILGAFAVDLLVLVLALAAGHLFARHVNADNATILRLQTLFLSAFAVIEFF
KAVLRLIFAPNFDYLRPFPFSDAGAHYWNKRLAWLSGLIGYGLMVLVPVVAVQISYPAAA
AVNLAVMLALTLYAIWLILHNRKPIQQQINLLATRSMAFFSVILRGLGHIWHLLAIAYFL
VLFALSQLDIGNSLRFMMTATVKSLLVIGVGALLSGMLTRWIFRRISLPTDVNLRYPLLE
RRINSYIPNGLKILRVMVVLTVTLFLFDAWHLINLHQWASSENGERAIGGLVHILLILLI
AVFSWTLLASIIEHRLALELSNGIRPSARERTLLTLFRNVLAIVISTITIMIVLSQVGIN
IAPLLAGAGALGLAISFGAQTLVKDVITGVFIQFENGMNTGEYVTVGGITGTVERMTIRS
IGLRDDYGVYHIVPFSSITTLANYAREFGVYRANYTVSRDEDIDRVNEVLHQAVEALKQD
EQVKHFLIGEPTFNGVVALGDRSFTTRVTVRTQALKQWVVQYALDRLVKMHFDQAGISMP
QQAMQLSYAPGQPQPESSPAGD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaacgcatgctcccgattcagttctcatctgcgagaacgtctgctgcccctg
ctgctgttgttgctgctgtcaatgtgcgccgcgccgccggcgcagagcgcgccaaccgcc
cccgccgatcggacagaacagcaaaaggcctcctacgccgccctggctgacatcctgcag
gatgaccaggcgcgcgccgaacttatcgcgcacctgaagcaatccgccggcgaatcgccc
gccgacaacgcctcgccgcccgctcggcccgaggccgaacaagcgccggcgacgctgagc
gatagcctgaacggcctggcgcaggaaggcatcggcagccttaaccaaaagcttcacctg
cggcaaaagctgatcgactccggccccaagcgcgtctttcagcccgatcgcttcttccgc
gctctgggttatttcttgctgacggtggcggtcaccttcgccctgttccacctgatccgc
cgcctgatcgccccgctgtacaaacgtatgggcagctgggggcacaacgccaggctgcag
aacggcccctggtataaacgccccgcagccatcctcggcgccttcgccgtcgatctgctg
gtgttggtgctggcattggcggcggggcacctgttcgcccgccacgtcaatgccgacaac
gcgacgatcctgcgcctgcaaacgctgtttctcagcgcctttgcggtgattgagttcttc
aaggcggtgctgcggctgatcttcgcgcccaatttcgattatctgcggccttttcccttc
agcgacgccggtgcgcactactggaataagcgcctggcctggctcagcgggctgatcggc
tacggcctgatggtgctggtgccggtagtggcggtgcaaatcagctacccggcggcggcg
gcggtgaatctggcggtgatgctggcgctgacgctgtacgccatctggctgatcctgcat
aaccgcaaaccgatacagcagcaaatcaatctgctggccacgcgttcgatggcgttcttc
agcgtgatcctgcgcggcctggggcacatctggcacctgctggccatcgcctatttcctg
gtgctgtttgcgctttcacagctcgatatcggcaacagcctgcgctttatgatgaccgcg
acggtgaaaagcctgctggtgatcggcgtgggcgccctgctttccggcatgctgacccgc
tggattttccgacgcatctcgctgccgaccgacgtcaacctgcgctacccgctgctggaa
cggcgcatcaactcctacatacccaacgggctgaaaatcctgcgggtgatggtggtactg
acggtgacgctgttcctgttcgacgcctggcatctgatcaacctgcaccaatgggcgagc
agcgagaacggggaaagggcgatcggcgggctggtgcatatcctgttgatcctgctgatt
gcggtgttcagctggaccctgctggccagcattatcgaacaccgtctggcgctggagctc
agcaacggcattcgcccaagcgcgcgcgagcgcaccctgctgacgctgtttcgcaacgtg
ctggccatcgtcatcagcaccatcaccatcatgatcgtgctgtcgcaggtggggattaac
attgcgccgctgctggcgggcgccggcgcgctcggcctggcgatcagcttcggcgcgcaa
acgctggtgaaggacgtgatcaccggggtgttcattcagttcgaaaacggcatgaacacc
ggcgagtacgtgaccgtcggcggcatcaccggcaccgtcgaacgcatgaccatccgttcg
atcggcctgcgcgacgactacggcgtctatcacatcgtgcccttttcctcgatcaccacg
ctggcgaactacgcgcgcgaatttggcgtttaccgcgccaactacaccgtcagccgcgac
gaagatatcgaccgggtcaacgaagtgctgcatcaggccgtcgaggcgctgaaacaggat
gagcaagtgaagcatttcctgatcggcgaaccgacgttcaacggcgtggtggcattgggc
gatcgctcattcaccacccgcgttacggtgcgaacccaggcgctgaaacagtgggtggtg
caatacgccctcgacaggctggtgaagatgcacttcgaccaggccggcatcagcatgccg
cagcaggcgatgcagctgtcgtatgcgccagggcaaccccagccagaatcctcccccgcg
ggggattaa
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