Serratia ficaria: SAMEA4384070_1624
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Entry
SAMEA4384070_1624 CDS
T06444
Symbol
rffG_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase 2
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sfj
Serratia ficaria
Pathway
sfj00521
Streptomycin biosynthesis
sfj00523
Polyketide sugar unit biosynthesis
sfj00525
Acarbose and validamycin biosynthesis
sfj00541
Biosynthesis of various nucleotide sugars
sfj01100
Metabolic pathways
sfj01110
Biosynthesis of secondary metabolites
sfj01250
Biosynthesis of nucleotide sugars
Module
sfj_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
sfj_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAMEA4384070_1624 (rffG_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SAMEA4384070_1624 (rffG_1)
01055 Biosynthesis of vancomycin group antibiotics
SAMEA4384070_1624 (rffG_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SAMEA4384070_1624 (rffG_1)
00525 Acarbose and validamycin biosynthesis
SAMEA4384070_1624 (rffG_1)
Enzymes [BR:
sfj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SAMEA4384070_1624 (rffG_1)
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
SNV97620
UniProt:
A0A240BQ17
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All DBs
Position
1:1704028..1705092
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AA seq
354 aa
AA seq
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MKIIVTGGAGFIGSAVARHIINDTADEILVLDSLTYAGNLESLKTIADSERYTFEHADIC
NRAELDRIFSEFKPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARQYWNTLDA
DGKKAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGFP
TIVTNCSNNYGPYHFPEKLIPLIILNALDGKSLPVYGNGAQIRDWLYVEDHARALYKVVT
EGEVGETYNIGGHNERKNIEVVQTICRLLDELVPNKPAGVGQYEDLITYVTDRPGHDIRY
AIDASKIERELGWKPQETFESGIKKTVEWYLANEEWWSRVKDGSYAGERLGQAR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatcgttaccggcggtgccgggtttattgggtctgctgtggctcgccatatt
attaacgataccgcggatgagatcttggttctggatagcctgacctatgcagggaatctc
gagtcgttaaaaacgattgcagacagcgagcgttatacatttgaacatgccgatatttgc
aatcgtgcagaactggaccgcatctttagtgaatttaaaccagatgcagtgatgcatctg
gctgcagaaagccacgtagaccgttctattgatggccccgccgcatttattgaaaccaat
attgtgggtacttacactctcctggaagcggcgcgtcaatattggaatacgctggatgcg
gacgggaaaaaggcattccgtttccatcatatttctaccgatgaagtctatggcgacttg
catggtaccgatgacctgtttaccgagaccacgccgtatgccccaagcagcccgtattcc
gcttctaaagcgtccagcgaccatctggttcgcgcgtggctgcgtacctacggtttccca
accatagtcaccaactgttccaacaactatggtccttatcatttcccggaaaaattgatc
ccgctgatcatccttaacgcactggatggcaaatccttaccggtttatggcaatggcgca
caaattcgtgattggctgtatgtagaagaccatgcccgtgcgctatataaagttgtcaca
gagggggaagtgggggagacctacaacatcggtggccataacgagcgtaaaaatatcgaa
gtggtgcaaacaatttgccgcttgttggatgagttggtgccaaacaaaccggcaggcgtg
gggcaatatgaagacttgattacctatgtcactgaccgtcctggccacgatattcgttac
gcgattgatgcttcaaaaattgagcgagagctgggttggaagcctcaagagacgtttgag
agcggtattaaaaaaacggtagaatggtatctggcgaatgaagagtggtggagccgagtt
aaagatggttcatatgctggtgagcgcttaggtcaggcccgttaa
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