Serratia ficaria: SAMEA4384070_1670
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Entry
SAMEA4384070_1670 CDS
T06444
Symbol
metC_1
Name
(GenBank) Cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
sfj
Serratia ficaria
Pathway
sfj00260
Glycine, serine and threonine metabolism
sfj00270
Cysteine and methionine metabolism
sfj00450
Selenocompound metabolism
sfj00670
One carbon pool by folate
sfj01100
Metabolic pathways
sfj01110
Biosynthesis of secondary metabolites
sfj01230
Biosynthesis of amino acids
Module
sfj_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAMEA4384070_1670 (metC_1)
00270 Cysteine and methionine metabolism
SAMEA4384070_1670 (metC_1)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SAMEA4384070_1670 (metC_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAMEA4384070_1670 (metC_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfj04147
]
SAMEA4384070_1670 (metC_1)
Enzymes [BR:
sfj01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
SAMEA4384070_1670 (metC_1)
Exosome [BR:
sfj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SAMEA4384070_1670 (metC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
SNV97810
UniProt:
A0A240BQK7
LinkDB
All DBs
Position
1:complement(1754779..1755924)
Genome browser
AA seq
381 aa
AA seq
DB search
MAKFDTLTVHAGYTPDATGAVMPAIYATSTYAQPAPGEHTGYEYSRSANPTRTALESAIA
ALEGGSRGYAFASGLAACSTVLELLDQGSHLVAVDDLYGGTYRLLEKVRSRTAGLRVTYV
APADIAALEQAIEPDTKMIWVETPTNPLLKLADLRAIAAIAKRRGLISVADNTFASPYIQ
RPLELGFDLVVHSATKYLNGHSDVVAGVAAVGDNPALAEQLGFLQNAVGGILDPFSSFLT
LRGMRTLALRMERHSNSALRIAQWLESQPQVENVYYPGLPSHPQHALAARQMSRFGGMIS
VRLQGDDAYARRVIKRSKLFTLAESLGGVESLIGQPFSMTHASIPLEQRLKTGITPQLLR
LSVGIEDAEDLIADLQQALAE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtttgatacgttgaccgttcacgcaggttacacccccgacgccaccggcgcc
gtgatgccggcgatttacgccacctccacctacgcccaaccggcgccgggcgagcatacc
ggctatgaatattcgcgcagcgccaacccgacgcgcaccgcgctggaaagcgccatcgcc
gcactggagggcggcagccgcggctacgccttcgcctctggcctggcggcctgctcgacg
gtgctggagctgctcgatcagggcagccatctggtggcggtcgacgatctgtacggcggt
acctatcgcctgctggaaaaggtgcgcagccgcaccgccggcctgcgcgtcacctacgtt
gcgccggcggacatcgccgcgctggagcaggcgatcgagccggacaccaaaatgatctgg
gtggaaacccccaccaacccgctgctcaagctggccgatctgcgcgccatcgcggcgatc
gccaaacggcgcgggctgatcagcgtagcggacaacaccttcgcctcgccgtatattcag
cgcccgctggagctcggttttgacctggtggtgcactccgccaccaaatacctcaacggc
cattccgacgtggtggccggggtggcggcggtgggcgacaacccggcgctggcggagcag
cttggcttcctgcagaacgcggtgggcggcatcctcgatccgttcagcagcttcctgacg
ctgcgcggcatgcgcacgctggcgctgcgcatggagcgccacagcaacagcgcgctgcgc
atcgcccagtggctggaaagccagccgcaggtggaaaacgtttactacccgggcctgccg
agccatccgcagcatgcgctggcggcgcggcagatgagccgcttcggcggcatgatctcg
gtgcgcttgcaaggcgacgacgcctatgcgcgccgggtgattaaacgttcgaagctgttc
accctggcggagagcctgggcggcgtggagagcctgatcggccagccgttcagcatgacc
catgcctcgatcccgctggagcagcggctgaagaccggcattaccccgcagctgctgcgg
ctgtcggtggggatcgaggatgcggaagacctgattgccgatttgcaacaggcgctggcg
gagtaa
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