Serratia ficaria: SAMEA4384070_1749
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Entry
SAMEA4384070_1749 CDS
T06444
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfj03032
]
SAMEA4384070_1749 (ihfB)
03036 Chromosome and associated proteins [BR:
sfj03036
]
SAMEA4384070_1749 (ihfB)
03400 DNA repair and recombination proteins [BR:
sfj03400
]
SAMEA4384070_1749 (ihfB)
DNA replication proteins [BR:
sfj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAMEA4384070_1749 (ihfB)
Chromosome and associated proteins [BR:
sfj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SAMEA4384070_1749 (ihfB)
DNA repair and recombination proteins [BR:
sfj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SAMEA4384070_1749 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
MDMPI_C
HU-DNA_bdg
HAAS
Motif
Other DBs
NCBI-ProteinID:
SNV98406
UniProt:
A0A240BU05
LinkDB
All DBs
Position
1:1847806..1848090
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AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHIPAKAVEDAVKEMLEHMAATLADGERIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELDGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaagacttgctggccagcaatctcatattccggcgaag
gccgttgaggatgcagtgaaagagatgctcgaacatatggctgccacattggccgatggc
gaacgcatcgagatccgcggattcggcagtttttctcttcactaccgtgctccgcgtgtg
ggtcgcaacccgaaaaccggcgataaagtcgagctggacggcaagtacgttcctcacttc
aagccaggcaaagagttgcgtgaccgcgccaatatctatggctag
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integrated database retrieval system
