Serratia ficaria: SAMEA4384070_1765
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Entry
SAMEA4384070_1765 CDS
T06444
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfj01002
]
SAMEA4384070_1765
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfj01011
]
SAMEA4384070_1765
Peptidases and inhibitors [BR:
sfj01002
]
Cysteine peptidases
Family C82
SAMEA4384070_1765
Peptidoglycan biosynthesis and degradation proteins [BR:
sfj01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SAMEA4384070_1765
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
SNV98482
UniProt:
A0A240BSW7
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Position
1:1867988..1869820
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AA seq
610 aa
AA seq
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MLLKNGNSIRRLALSCAIACGLASSLPAWATVPAFPVASSGMSVAQSRSELLAALPRGMA
PHYLSTLAPLYAANHMQPMWQDREAVQQFQQQLAELAMSGVQPQFTQWVKMLTDQAINDV
GRDIVLSDAMLGYLQFVSAIGANGNSWLYSNIPYKLGLPPNAVINQWQLAVRQGRTLGYV
NSLAPQHPQYAKMHQALRDMLANNRPWPQVANGPSLRPGQLSNDIPALREILKRTGMLTD
AAPEAQPEPAVVLATRNEPDDGGLSVDEEKNRESQAAVSPAAAPVQDLSTSPNSALITQP
TAPATVSDNLYTDELVEGVKRFQKWQGLSADGVIGARTREWLNVSPKTRAALLALNIQRL
RILPGHVGTGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWN
VPTTLVREDIVPKAMRDGNYFQKHGYTVLSGWSNDAEVINPAMIDWSMVSARNFPYRVRQ
APGATNSLGRFKFNMPSSDAIYLHDTPNHSLFQKDIRALSSGCVRVNKASDLANMLLQDA
GWNNNRVSSTLKEGNTTYVNIRQRIPVKLYYLTAWVSDDGQPQFRTDIYNYDNTVRSGAQ
ILAQAEKLMQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaaaaatggaaactcaatacggcgtctggcgctgagttgcgctatcgcatgt
ggtcttgcgtcgtcgttacccgcatgggcaaccgtgccggcgtttccggtggcgtcatcc
ggcatgtccgttgcgcaaagccgttcggaactgttggccgccttgccgcgaggcatggcg
ccgcactacctttcaaccttggctcctctctacgcggcgaatcatatgcagccgatgtgg
caggatcgcgaggcggtgcagcagtttcaacagcagttggccgagttggcgatgtccggc
gtgcagccgcagttcacccaatgggtgaaaatgctcaccgatcaggcgattaacgacgtg
gggcgcgacattgtgttgtccgacgccatgctcggctatctgcagttcgtttccgccatc
ggcgccaacggcaacagctggctctacagcaatattccctacaagctcggtctgccgccg
aacgcggtgatcaaccagtggcaactggcggtgcgccagggcagaaccctgggctacgtc
aattcgctggcgccgcagcatccgcagtacgccaagatgcatcaagcgctgcgcgacatg
ctggccaataaccggccgtggccgcaggtcgccaacggcccgagcctgcgccccggccag
ctgagcaatgacattccggcgctgcgcgaaatcctcaagcgcaccggcatgctgaccgat
gccgcgccggaagcgcagccggagccggcggtggtgctggcgacgcgcaatgagcccgat
gacggcggtctgtcggtcgatgaagagaaaaaccgcgaaagccaggcggcggtcagcccg
gcggcggcgccggtgcaggatctcagcacctcgcccaactccgcgctgattacgcagccg
acggcgcccgcgacggtcagcgataacctgtacaccgacgaattggtggaaggggtcaag
cgcttccagaaatggcaagggctgagcgccgacggcgtgatcggcgcgcgcacccgcgaa
tggctgaatgtttcaccgaaaacccgcgccgcgctgctggcgttgaatatccagcgcctg
cgcatcctgccggggcacgtcggcaccgggattatggtgaacattcccaattattcgctg
acctactaccaaaacggcaacgaggtgctgtcttcacgggtgatcgtggggcggccgagc
cgtaaaacgccgctgatgagcagcgcgctgaacaacgtggtggtcaacccgccgtggaac
gtgccgactacgctggtgcgcgaggatatcgtgccgaaggcgatgcgcgacggcaactac
ttccagaaacacggctataccgtgctttccggctggagcaacgacgccgaggtgattaac
ccggcgatgatcgactggagcatggtttccgcgcgcaacttcccgtaccgggtgcgccag
gcgccgggcgctaccaactcgctggggcgcttcaaattcaacatgccaagctcggacgcc
atctatctgcacgatacgccgaaccacagcctgttccagaaagacattcgcgcgctcagc
tccggctgcgtgcgggtgaacaaagcgtctgatttggcgaatatgctgctgcaggacgcc
ggctggaacaacaatcgcgtttcttccacgctgaaagaggggaataccacttacgtgaat
attcgccagcgtattccggttaaattgtattatctgacggcttgggtttctgacgacggc
cagccgcaattccgtacagatatttacaattatgataatacggtgagatcgggcgcacaa
attttggcccaggccgaaaaattaatgcaataa
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