KEGG   Serratia ficaria: SAMEA4384070_1797
Entry
SAMEA4384070_1797 CDS       T06444                                 
Symbol
helD
Name
(GenBank) Helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
sfj  Serratia ficaria
Brite
KEGG Orthology (KO) [BR:sfj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfj03400]
    SAMEA4384070_1797 (helD)
Enzymes [BR:sfj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAMEA4384070_1797 (helD)
DNA repair and recombination proteins [BR:sfj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SAMEA4384070_1797 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 nSTAND_NTPase5 DEAD STAT_int AAA_2
Other DBs
NCBI-ProteinID: SNV98652
UniProt: A0A240BTF6
LinkDB
Position
1:1908239..1910293
AA seq 684 aa
MELKATSLGKHLAQHPYNRVRLLHAGVEVSGEKHEYLIPFNQLIQVRCKRGIVWGELEFE
LPDEKVVRLHGTEWQETQRFYHYLQQAWQQWSAEMSEVSAGVLQQQVEQIQRIEQQDKWF
KKSELGKLQQQIRQSFDALPMPVVRLDEFDNCRDDYQRCLQWLQHGLHSIEQRNRQWTER
MLETHHDFFQTVESSPLNDSQSRAVANGEDSVLVLAGAGSGKTSVLVARAGWLLRRQEAE
PGQILLLAFGRQAAGEMNERIKERLGDVGIQAKTFHALALQIIQQGNRKVPAISKLETDG
KARKALLIANWQQQCAEKKAQAKGWRQWLTEELEWEVPEGDFWQDKRLAERLAGRLERWL
GLMRMHGGSQAEMIEQADDEIRDLFSKRIRLMAPLLKAWKSALKDEGAVDFSGLIHQAVN
ILEKGRFVSPWKHILVDEFQDISPQRAQLLAALRKQNKQTCLFAVGDDWQAIYRFSGAEL
ALTTAFAANFGEGAQCALDTTYRFNERIGEVANRFVLQNPHQLKKPLNSLSKGNKKSVAI
LPHEQLEALLDKLSGYAKPEESILVLARYHHLKPQALAKAATRWPKLNIEFMTIHASKGQ
QAEYVIIAGLHEGGDGFPAVARESVLEDVLLPQPEDFPDAEERRLLYVALTRAKHQVWLL
QDRERPSVFVEQLQDLGVPLQKKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacatcgctggggaaacacctggctcagcacccttacaaccgcgtg
cggctgctgcacgccggcgttgaggtcagcggcgagaagcatgaataccttatcccgttc
aaccagctgatacaggtcaggtgcaagcgcggcatcgtctggggcgaactggagtttgaa
ctgcccgacgagaaagtggtgcggctgcacggcaccgagtggcaggagacccagcgtttt
tatcactacttgcagcaggcctggcagcagtggagcgcggagatgagcgaggtcagcgcc
ggggtgctgcagcagcaggtcgagcagatccaacgcatcgaacagcaggataaatggttt
aaaaaatccgagctgggcaagctgcagcagcagatccgccagtccttcgacgcgttgccg
atgccggtggtgcggctggatgagttcgacaactgccgtgacgattatcaacgctgcctg
cagtggctgcagcatggcctgcacagcatcgaacagcgcaaccggcagtggaccgaacgc
atgctggaaacccatcacgactttttccagacggtcgaaagttcgccgctgaatgattcg
cagagccgcgcggtggcgaacggcgaagactcggtgctggtgctggccggcgccggcagc
ggtaaaacctcggtgctggtggcgcgcgccggctggctgctgcgccgtcaggaagccgaa
cccgggcaaattttgctgttggcgttcggccgccaggcggccggcgaaatgaatgagcgc
atcaaggaacggctgggcgacgtcggcatccaggcgaaaaccttccatgctctggcgctg
cagatcattcagcagggcaatcgaaaagtgccggctatcagcaagctggaaaccgacggc
aaagcgcggaaagcgctgttgatcgccaactggcagcagcaatgcgcggagaaaaaggcg
caggccaaagggtggcgtcaatggctgaccgaagaactcgagtgggaagtgccggaaggg
gatttctggcaggataagcggctggcggagcggctggccgggcggctcgaacgctggctg
gggttgatgcgcatgcacggcggcagccaggcggaaatgatcgaacaggcggacgacgaa
atccgcgacctgttctcaaaacgcatccggctgatggcgccgctgttgaaggcctggaaa
agcgccttgaaagacgaaggggcggtggacttctccggcttgatccatcaggcggtcaat
attctggaaaaaggccgctttgtcagcccgtggaaacacatcctggtggatgagtttcag
gatatctcgccgcagcgcgcccagctgctggcggcgctgcgcaagcagaacaagcagacc
tgcctgttcgcggtgggggatgactggcaggcgatctatcgctttagcggcgccgagctg
gcgctgaccacggcgttcgccgccaacttcggcgaaggggcgcagtgcgcgctggacacc
acctaccgcttcaacgagcgcatcggcgaagtggccaaccgctttgtgctgcagaacccg
caccagttgaaaaaaccgctgaacagcctgagcaagggcaacaaaaaatcggtggcgatt
ttgccgcacgaacagctggaagcgctgctggacaagctgagcggctatgccaagccggaa
gaaagcatcctggtgctggcgcgctatcatcacctgaaaccgcaggcgctggccaaagcg
gcgacccgctggccgaagctgaatatcgagttcatgaccattcacgccagcaaggggcag
caggcggaatatgtgattattgccggtttgcacgagggcggcgacggttttccggcggtg
gcgcgcgagtcggtgctggaggatgttttactgccgcagccggaagatttcccggacgcc
gaagagcggcgcttgctgtacgtggcgctgacccgcgccaaacaccaggtctggctgctg
caggatcgcgaacgcccctcggtgtttgtcgaacagctgcaggatcttggcgtgccgctg
cagaaaaaaccctaa

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