Serratia ficaria: SAMEA4384070_1851
Help
Entry
SAMEA4384070_1851 CDS
T06444
Symbol
rutR_2
Name
(GenBank) Rut operon repressor
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_1851 (rutR_2)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SAMEA4384070_1851 (rutR_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_21
Motif
Other DBs
NCBI-ProteinID:
SNV98911
UniProt:
A0A240BSS3
LinkDB
All DBs
Position
1:1976117..1976755
Genome browser
AA seq
212 aa
AA seq
DB search
MKSPTVKPSTRRSRAVAAKRSTIMDAALEFFSLYGIHGTSLDQVAERADVSKTNLLYYFP
SKEDLYVAVLKGILDVWLAPLKALRADQEPLQAIRDYIRLKLEVSRHHPQASRLFCLEMI
QGAPLLKRELEGGLKTLVDEKSAMIERWVAAGHIAAVEPHHLIFMLWATTQHYADFWVQV
EAVTGKTLDDDAFFRQTVENVQRVIIDGIRPR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtcacccaccgtcaaaccgtctacgcgccgttcacgcgcggtggccgccaaacgc
agcaccatcatggatgcggcgctggagtttttctcgctgtacggcattcatggcaccagc
ctcgatcaggtggcggagcgcgccgacgtctccaaaaccaatctgctgtactacttcccg
tcgaaagaggatctgtacgttgcggtcctgaaaggcattcttgacgtctggctggcgccg
ctgaaggcgctgcgcgccgatcaggagccgctgcaggcgatccgcgattacattcgcctg
aagctggaggtttcgcgccatcatccgcaggcttcgcggttgttttgcctggaaatgatc
cagggggcgccgctgctgaagcgcgagctggaaggggggctgaagacgctggtggacgaa
aagtcggcgatgatcgaacgctgggtggccgcaggccacattgcggcggtggagccgcac
catctgattttcatgctgtgggccaccacccagcactacgcggatttttgggtgcaggtg
gaagcggtgaccggcaagacgctggacgacgacgcctttttccggcaaacggtagagaat
gtgcagcgggtgattatcgatgggatccggccgcgctga
DBGET
integrated database retrieval system
