Serratia ficaria: SAMEA4384070_1884
Help
Entry
SAMEA4384070_1884 CDS
T06444
Symbol
rpiR
Name
(GenBank) Als operon repressor
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_1884 (rpiR)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
Other families
SAMEA4384070_1884 (rpiR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
MarR
SIS_2
SIS
HTH_61
Motif
Other DBs
NCBI-ProteinID:
SNV99092
UniProt:
A0A240BUQ8
LinkDB
All DBs
Position
1:complement(2002624..2003772)
Genome browser
AA seq
382 aa
AA seq
DB search
MDLVYHIQFRQNPFSRQEAKVARTLLDNPGFAAIATIEQLAARAGVSTEIVGHFAKSLGC
QDLNDFIGLMRAQPAAQAADGTAVPQPVLGGMDVAFATAADIGKLPGVNPDTLSRFARSI
GCEDIADIVYQIRARQNQLSQQEAKVAQTILDDIAFASSATIEQLAAQAAVSPATITRFA
KTLGCDDIRDLRMKLAQASVAGSRYLNGAPPADDSGPRLWRQRLGDVESTLHQQMQSLDH
AALIAVCQRLSQSKSVHIFGVGSMTLYVNDLQQRLVGMGCPAFACLDPALMRMTASTLGA
LQSVILLSGGGENGDLLNAARLTAATGAYSVALAPAGSTLAGLTDSLLPIGTGSAARYGL
MLTLDLLLAQLLPESLNAQAAD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgtttaccacatccagtttcgacaaaatccgttcagccggcaggaagcgaaa
gtagcccgcacgctgctggataacccgggttttgccgccatcgccaccatcgaacagctg
gcggcgcgcgccggcgtcagcaccgagatcgtcggccacttcgccaaatcgctcggttgc
caggatctcaacgattttatcggcctgatgcgcgcccagccggcggcgcaggcggccgac
ggcaccgccgtgccccagccggtactgggcggcatggacgtcgccttcgccaccgccgcc
gacatcggcaagctgccgggcgtcaacccggataccctcagccgcttcgcacgatccatc
ggctgtgaagacatcgccgacatcgtctaccaaattcgcgcccggcaaaatcagttgagc
caacaggaagccaaggtggcgcaaaccatcctggacgatatcgccttcgcctcctccgcc
acgatcgaacagctggcggcccaagccgccgtcagcccggccaccatcacccgcttcgcc
aaaaccctgggctgcgacgacatccgcgatctgcgcatgaagctggcgcaggccagcgtg
gcggggtcccgttatctgaacggcgcgccgcccgccgacgacagcgggccgcgcctgtgg
cggcagcggctcggcgatgtggaaagcaccctgcatcagcagatgcaatcgctggatcac
gccgcgctgatcgctgtctgccagcgcctgagccagtcgaaaagcgtccatatttttggc
gtcggcagcatgacgctgtatgtcaacgacctgcagcagcgcctggtgggcatgggctgc
ccggccttcgcctgcctggatccggcgctgatgcgcatgaccgcctccaccctcggcgcg
ctgcaaagcgtgatcttgctgtcgggcggcggcgaaaacggcgacctgctcaatgccgcc
cggctgaccgccgctaccggcgcctacagcgtcgcccttgcgcccgccggcagcacgctg
gccggattgacggacagcctgttgccgatcggcaccggcagcgcggcgcgctatgggctg
atgctgaccctcgatctgctgctggcgcagctgttgccggagagcctgaacgcgcaggcg
gcggattga
DBGET
integrated database retrieval system
