Serratia ficaria: SAMEA4384070_1967
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Entry
SAMEA4384070_1967 CDS
T06444
Symbol
soxS_1
Name
(GenBank) Regulatory protein soxS
KO
K05804
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_1967 (soxS_1)
03036 Chromosome and associated proteins [BR:
sfj03036
]
SAMEA4384070_1967 (soxS_1)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SAMEA4384070_1967 (soxS_1)
Chromosome and associated proteins [BR:
sfj03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SAMEA4384070_1967 (soxS_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
POLH-Rev1_HhH
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
SNV99591
UniProt:
A0A240BUT9
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All DBs
Position
1:2084646..2085005
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AA seq
119 aa
AA seq
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MNNTGFITDLIAWIDNNLEEKLDINTVADRAGYSKWHLQRMFKRQTGYALGEYIRMQKLK
VSAERLANSGEPIVSVAISLGFDSQQSFNRSFKRQFGQTPGDWRRALTQPQAALGRTHH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatacgggctttattactgatttgatcgcgtggattgacaacaatctggaagag
aagctggatatcaacaccgtggcggatcgcgcgggttactccaagtggcacctgcagcgc
atgttcaagcgccagaccggctacgcgttgggggagtacattcgcatgcagaagctgaag
gtttctgccgagcggttggccaacagcggcgagcctatcgtcagcgtggcgatctcattg
ggttttgattcgcagcagtcgttcaatcgcagcttcaaacgccagttcggccaaacgccg
ggcgactggcgccgcgcgctgacgcagccgcaggcggcgctggggcgaacccaccactga
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