Serratia ficaria: SAMEA4384070_2235
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Entry
SAMEA4384070_2235 CDS
T06444
Name
(GenBank) glycolate oxidase subunit GlcD
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
sfj
Serratia ficaria
Pathway
sfj00310
Lysine degradation
sfj01100
Metabolic pathways
sfj01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SAMEA4384070_2235
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GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_17
Fer4_20
Fer4_10
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
SNW00794
UniProt:
A0A240BYK3
LinkDB
All DBs
Position
1:2354276..2357332
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AA seq
1018 aa
AA seq
DB search
MIPQISQAPGLVQRVLDFLEALKHNGFNGDTATSYADRLTMATDNSVYQLLPDAVVFPRS
TSDVALIARLAAEERFKALTFSPRGGGTGTNGQSLNTGIVVDMSRHMNRILEINVEQGWV
RVEAGVIKDQLNQYLRPFGYFFSPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGL
RAVLLGGEMIDTRAMPTPLAETIAQEDSAEGRIYHRVLNSCRDRRALILEKFPKLNRFLT
GYDLRHVLSDDLQTFDLTRILTGAEGTLAFITEARLDITPLPKVRRLVNVKYDSFDSALR
NAPFMVAAKALSVETIDSKVLNLAREDIVWHSVSELITNVPDKEMLGLNIVEFAGDDQEL
IDGQMESLCRRLDELIAGRQGGVIGYQVCGDLAGIERIYNMRKKAVGLLGNAKGQAKPIP
FAEDTCVPPQHLADYIVEFRQLLDSHNLSYGMFGHVDAGVLHVRPALDMCDPQQEVLMKQ
ISDQVVALTAKYGGLLWGEHGKGFRAEYSPEFFGETLYEELRRIKAAFDPDNRLNPGKIC
SPLNLDAPMMQVDAVKRGTFDRQIPIAIRTSFRGAMECNGNGLCFNFDVRSPMCPSMKIT
GSRIHSPKGRAALVREWLRLLSEQGVDPLALEKQLPQQRLSFRTLIEKTRNSWYAGKGEY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPGFRSRFLQLYHTRYLRPARDYMVAGVESYT
PLMAKAPKVFNFFFRQPWVRELSRNAIGMVDLPMLSSPTLRQQLSGHAAVTLTLEQLEGL
SAAQRENHVLIVQDPFTSYYDAKVVADFVRLVEKLGYQPVLLPFSPNGKAQHIKGFLTRF
ARTARKTADFLNRVAQLGMPLVGVDPALVLCYRDEYNEILGEHRGAFQVQLVHEWLQQLV
AERAEQPATGEPWYLLGHCTETTALPASGQQWAAIFSRFGARLENVSVGCCGMAGTYGHE
VKNLQNSLGIYELSWHPALQRLPRQRCLATGYSCRSQVKRIEGNGVRHPLQALLEMIV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacagatttctcaggcgcccggcctcgttcaacgggtgctcgactttttggaa
gcactgaagcacaacggattcaacggcgataccgccaccagctatgccgaccggctgacg
atggccaccgacaacagcgtttaccagctgttgcccgatgcggtggtgtttcctcgctcc
accagcgatgtggcgctgatcgcccgtctggcggcggaagagcgcttcaaggcgctgacc
ttcagcccgcgcggcggcggtaccggcaccaacgggcagtcgctcaataccggcatcgtg
gtcgacatgtcgcgccacatgaaccgcattctggaaattaacgtcgaacagggctgggtg
cgggtggaggccggggtcatcaaggaccagctcaaccagtatctgcggccgttcggttat
ttcttctcgccggagctctccaccagcaaccgcgccacgctgggcggcatgatcaacacc
gacgcctccggccagggctcgctggtgtacggcaaaacctccgatcacgtgctcggcctg
cgggcggtgctgctgggcggtgaaatgatcgacacccgcgccatgccgacgccgctggcg
gaaacgattgcccaggaagacagcgccgaagggcgcatctaccatcgggtgctgaacagc
tgccgcgaccggcgcgcgctgatcctggaaaaattccccaagctcaaccgcttcctgacc
ggttacgacctgcgccacgtgctgagcgacgacctgcaaaccttcgatctgacgcgcatt
ctgaccggcgccgaaggaacgctggcgttcatcaccgaggcgcgcctggacattacgccg
ctgccgaaggtgcgccggttggtgaacgtcaaatacgactccttcgattccgcgctgcgc
aatgcgccctttatggtggcggccaaggcgctgtcggtggaaaccatcgactccaaggtg
ctgaacctggcgcgcgaagacatcgtctggcattcggtcagcgaactgatcaccaacgtg
ccggataaggaaatgctcggtctgaacatcgtggaattcgccggcgacgaccaggaactg
atcgacgggcagatggaaagcctgtgccggcggctggatgagctgatcgccgggcggcag
ggcggcgtgatcggttatcaggtctgcggcgatctggcgggcatcgaacgcatttacaat
atgcgcaagaaggcggtcgggctgctgggcaacgccaaagggcaggccaagccgatcccg
ttcgccgaagacacctgcgtgccgccgcagcatctggcggactatatcgtcgagttccgc
cagctgctggacagccataacctcagctacggcatgttcggccacgtcgatgcaggggtg
ctgcacgtgcggccggcgctcgacatgtgcgatccgcagcaggaagtgctgatgaagcag
atttccgaccaggtggtggcgctgaccgccaagtacggcggcctgctgtggggcgaacac
ggtaaagggttccgcgcagaatacagcccggaattcttcggcgaaacgctgtacgaagag
ctgcgccgcatcaaggcggcgttcgatcccgacaatcggctgaacccgggcaagatttgt
tcgccgctgaacctggatgcgccgatgatgcaggtggacgcggtcaagcgcggcaccttt
gatcgccagatcccgatcgcgatccgcacctcgttccgcggcgcgatggagtgcaacggc
aacggcctgtgcttcaactttgacgtgcgcagcccgatgtgcccgtcgatgaagatcacc
ggcagccgcattcactcgccgaaggggcgtgcggcgctggtgcgcgaatggctgcggctg
ctgtccgagcagggcgtcgatccgctggcgctggaaaaacagctgccgcagcagcgcctc
agcttccgtacgctgatcgagaaaacccgcaatagctggtacgccggcaagggcgaatac
gacttctcgcacgaggtgaaagaggcgatgtccggctgcctggcctgtaaagcctgttcc
acccagtgcccgatcaaaatagacgtgccgggtttccgctcgcgcttcctgcagctgtat
cacacccgctatctgcgcccggcgcgcgattatatggtggccggagtggaaagctacacg
ccgctgatggccaaggcgccgaaggtgttcaacttcttcttccggcagccctgggtgcgg
gaattgagccgcaacgccatcggcatggtcgatctgccgatgctgtcgagcccgacgctg
cgccagcagctctccgggcacgccgccgttaccctgacgctggagcagttggaagggctg
agcgccgcgcagcgcgaaaatcacgtgctgatcgtgcaggatccgttcaccagttattat
gacgccaaagtggtggcggactttgtccggctggtggaaaaactcggctaccagccggtg
ctgctgccattttcgccgaacggcaaggcgcagcacattaaaggtttcctgacgcgtttt
gcccgcaccgcgcgcaagaccgccgatttcctcaaccgggtggcgcagctcggcatgccg
ctggtgggcgtcgacccggcgctggtgctgtgttaccgcgatgaatacaacgagatcctc
ggtgaacatcgcggcgcgttccaggtgcagctggtgcacgaatggttgcagcagttggtg
gcggagcgcgccgagcagccggcgaccggcgagccctggtatctgctggggcactgcacc
gaaaccaccgcgctgccggccagcggccaacagtgggcggcgatcttttcccgcttcggc
gccaggctggaaaacgtcagcgtcggctgctgcggcatggccggtacctacgggcacgag
gtgaagaacctgcaaaactcgctcggcatttatgagctatcatggcatccggcgctgcag
cgtctgccgcggcaacgctgcctggcgaccggctattcgtgccgcagccaggtgaagcgc
atcgagggcaacggcgtgcgccacccattacaggcacttctggagatgattgtgtga
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