Serratia ficaria: SAMEA4384070_2272
Help
Entry
SAMEA4384070_2272 CDS
T06444
Symbol
dmlR_15
Name
(GenBank) D-malate degradation protein R
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_2272 (dmlR_15)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SAMEA4384070_2272 (dmlR_15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_24
HTH_5
HTH_IclR
HTH_30
Motif
Other DBs
NCBI-ProteinID:
SNW00925
UniProt:
A0A240BZ32
LinkDB
All DBs
Position
1:2391583..2392512
Genome browser
AA seq
309 aa
AA seq
DB search
MDKLNRMAVFATVVAEGTLAGAARRLGMTPSAVSQHMRSLEKALGVPLLHRSTRRLALTE
AGEAFYPGCEAMLFQAQQAEQRLAALRDTLVGELRIAAAVGIGGRPLAEALAPLLQAHPK
LRLRVLADDRVVDMIEHRVDIALRVNRQLADASMIAHPLAEWPMVLCAAPRYLSQHGVPE
KPQDLAQHRWISSGYGGAHLDLHHQSGEQVKLRLAEGQIVSDSMNVMRAFTRAGLGISVQ
PLYEIGDELQRGELIPLMPEWRPAPLRLHALTLERAMPEKNRQALRYLRDYFRRNGEKSL
ASGADGVFN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggataaactcaatcgaatggcggtattcgccaccgtggtggcggaggggaccttggcc
ggggcggcccggcgactgggcatgacgccgtcggcggtcagccagcatatgcgctcgctg
gaaaaggcgctcggcgtgccgctgctgcaccgttccacccggcggctggcgctgaccgaa
gcgggcgaggctttttatccgggctgcgaggcgatgctgtttcaggcgcagcaggccgaa
cagcgcctggcggcgctgcgggatacgctggtgggcgagctgcgcatcgccgccgccgtc
ggcattggcggccggccgctggccgaagcgctggcgccgctgctgcaggcgcatcccaag
ctgaggctgcgggtgctggcggatgaccgcgtcgtcgatatgattgaacaccgcgtcgac
attgcgctgcgggtcaatcgccagctggcggacgccagcatgatagcccacccgctggcg
gaatggccgatggtgctgtgcgccgcgccgcgctacctcagccagcacggggtgccggaa
aaaccgcaggatttggctcagcatcgctggatctccagcggctacggcggcgcgcatctg
gatttgcatcaccagtccggcgagcaggtgaagctgcgcctggcggaaggccagattgtc
agcgacagcatgaacgtcatgcgcgcctttacccgcgccggattgggcatttcagttcag
ccgctgtatgaaatcggcgacgagctgcagcgcggcgagttgatcccgctgatgccggaa
tggcgccctgcgccgctgcggctgcacgctctgacgctggagcgggcgatgccggagaaa
aatcgccaggcgctgcgctatttgcgcgactattttcgccgcaacggcgaaaagtcactt
gccagcggcgccgatggcgtcttcaattag
DBGET
integrated database retrieval system
