Serratia ficaria: SAMEA4384070_2522
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Entry
SAMEA4384070_2522 CDS
T06444
Symbol
fadD_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sfj
Serratia ficaria
Pathway
sfj00061
Fatty acid biosynthesis
sfj00071
Fatty acid degradation
sfj01100
Metabolic pathways
sfj01212
Fatty acid metabolism
sfj02024
Quorum sensing
sfj04146
Peroxisome
Module
sfj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SAMEA4384070_2522 (fadD_1)
00071 Fatty acid degradation
SAMEA4384070_2522 (fadD_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SAMEA4384070_2522 (fadD_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA4384070_2522 (fadD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sfj01004
]
SAMEA4384070_2522 (fadD_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfj04147
]
SAMEA4384070_2522 (fadD_1)
Enzymes [BR:
sfj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SAMEA4384070_2522 (fadD_1)
Lipid biosynthesis proteins [BR:
sfj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SAMEA4384070_2522 (fadD_1)
Exosome [BR:
sfj04147
]
Exosomal proteins
Exosomal proteins of breast milk
SAMEA4384070_2522 (fadD_1)
Exosomal proteins of breast cancer cells
SAMEA4384070_2522 (fadD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
SNW01659
UniProt:
A0A240C1P2
LinkDB
All DBs
Position
1:complement(2661128..2662669)
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AA seq
513 aa
AA seq
DB search
MLNLATLLEESARSWPDRSALVQDDIPLSYRALNELANRVANLLTARGVRPGERVALACP
NRPEFPAIYYGILKVGATVVPLNTLLKSAEFAYYLADSAAVAFFCHEGNEGLPLAAEARR
AFDDAENCRDFLIIGDRLPLEGERFSRAVAEQPTSFCSAVTAETDTAVVLYTSGTTGRAK
GAELSHSNLTLNALGSVRLFEGSETDPDRHLVTLPLFHTFGSTVQMNAGFACAATLVLME
RFDAAQAIALMQKHRVTFFAGVPTMYWALLNALDDKVDLARLRSTLRMAVSGGASLPVKI
LEDFSRRFGINILEGYGLSETSPVATFNHPRRQNKAGSIGQPIWGVEVRLLDVTGRPIDG
VDQVGELAVRGYNIMKGYLNRPEATAEALDNQGWFRTGDLGRRDADGFYFIVDRAKDMII
RGGFNVYPREIEEVLMRHPAVSLVAVIGVEHPALGEEIKAVVVLKAADDVIAEDELIAWC
KERLAAYKYPRILEFVERLPMTSTGKVLKRCLR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatttggcgaccttgcttgaagagagcgcgcgttcctggccagaccgctccgcg
ctggtgcaggacgacattccgctcagctaccgggcgttgaatgagctggccaaccgggtg
gcgaatttgttgaccgcgcgcggcgttcggcccggtgaaagggtggcgctggcctgcccg
aatcggccggagtttccggccatctattacggcattctcaaagtcggcgccaccgtggtg
ccgctgaacaccctgctgaaaagcgccgagtttgcatattacctggcggattccgctgcg
gtggccttcttttgccatgagggcaacgaagggttgccgctggcggccgaagcgcggcgc
gcttttgacgacgcagaaaattgtcgcgattttctgattatcggcgatcggttgccgctg
gagggagagcggttcagccgggcggtcgccgagcagcccacctcgttttgctcggcggtc
acggcggagaccgacaccgcagtggtgctttacaccagcggcaccaccgggcgcgccaag
ggcgcggagctgagccattccaatctgacgctcaatgcgttgggttcggtgcggctgttc
gagggatcggaaacggatcccgatcgccatttggtgacgctgccgctgttccataccttc
ggctccaccgtgcagatgaacgccggcttcgcctgcgccgccacgctggtgttgatggag
cgctttgacgccgcccaggccatagcgctgatgcaaaaacaccgcgtcaccttcttcgcc
ggcgtgccgaccatgtattgggcgctgctgaacgcgctggacgacaaggtggatctggcg
cgcttgcgcagcacgctgcgcatggcggtatccggcggcgccagcctgccggtgaagatc
ctggaagatttctcccgccgcttcggcatcaacatcctcgaagggtacgggttgtcggaa
accagcccggtggccaccttcaaccatcctcgccgccagaacaaagccggctcgataggt
cagccgatttggggcgtggaggtgcgcctgctggacgtgaccggccggccgatcgacggc
gtagaccaggtgggcgagttggcggtgcgcggctacaacatcatgaagggctatctgaac
cggccggaggcaacggcggaagcgctggataaccaggggtggttcagaaccggcgatctg
gggcgccgcgacgccgacggcttctattttatcgtcgaccgcgccaaggacatgatcatt
cgcggcggttttaacgtctacccgcgtgaaattgaagaggtgttgatgcggcatccggcg
gtgtcgctggtggcggtgatcggcgtcgagcatccggcgctgggcgaagagatcaaggcg
gtggtggtgctgaaggcggcggacgacgtcattgcggaagatgagctgatcgcctggtgc
aaggagcggctggcggcctataaatacccgcgcattctggagtttgtcgaacgcttgccg
atgaccagcaccgggaaggtgttgaaacgctgcctgcgctag
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