Serratia ficaria: SAMEA4384070_2572
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Entry
SAMEA4384070_2572 CDS
T06444
Symbol
abgR_3
Name
(GenBank) HTH-type transcriptional regulator AbgR
KO
K26290
LysR family transcriptional regulator, regulator of pal gene cluster
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_2572 (abgR_3)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SAMEA4384070_2572 (abgR_3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HSR
Motif
Other DBs
NCBI-ProteinID:
SNW01814
UniProt:
A0A240C1G6
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All DBs
Position
1:2717653..2718588
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AA seq
311 aa
AA seq
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MIVDKILRQFIEVAMFKNVSHAANKLCLSQPTLTHNMKKLEETLGVQLLERTSTGVNTTE
YGDLLLEQAQMMQRIYDNTLLKLAFIKARQEQSLRMGTGHAWWYMFVRDSFNAYRRLHPT
VNIHIDLGNHLRLMDLLLGGDIDLFIGHEIQGLNPKAGISFLPLFGTTDSMFVRRGHPLL
DQVVTPDALLDYPCVELTPDETRYQHMVEDMQPKRLARNRLHLAERVICSTNSMMSAVDM
VNDSDAVMLAYPSCMAGYFADYGIVPLQMNQESPRCTVGIYLMREKADAPHVVQMQELMR
QHLEQIRPLLR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggacaaaattctgcggcagtttatcgaagtggcaatgttcaaaaatgtgagt
catgcggcaaacaagctgtgcctgagccagccgacgctgacccacaacatgaaaaagctg
gaagagacgctgggggtgcagctgctggaacgcacgtcgaccggggtaaacaccaccgag
tacggcgatctgctgctggagcaggcgcagatgatgcagcgcatttacgacaacacgctg
ctcaagctggcgttcatcaaggcgcgccaggaacagagcctgcgcatgggcaccggccac
gcctggtggtacatgttcgtgcgcgacagcttcaacgcttaccgcaggctgcacccgacg
gtgaatattcatatcgatctgggcaaccatctgcggttgatggacctgctgctggggggc
gacatcgatctgtttatcggccacgagatccaggggcttaaccccaaggcgggcatcagc
ttcctgccgctgttcggcaccaccgacagcatgttcgtacgccgcgggcatccgctgctc
gaccaggtggtgacgccggatgcgctgctggactatccctgcgtggagctgacgccggat
gagacccgctatcagcacatggtggaagacatgcagccgaaacggctggcgcgcaatcgc
ctgcacctggcggaacgggtgatctgttccaccaactcgatgatgtcggcggtggatatg
gtcaacgattccgacgcggtgatgctggcctaccccagctgcatggcggggtattttgcc
gattacggcatcgtgccgctgcaaatgaaccaggaaagcccgcgctgcaccgtcggcatc
tacctgatgcgtgaaaaggcggatgcgccccatgtggtgcaaatgcaggaattaatgcgc
cagcacctggagcagatccgcccgctgttgcgctag
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