Serratia ficaria: SAMEA4384070_2812
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Entry
SAMEA4384070_2812 CDS
T06444
Symbol
ybbH_3
Name
(GenBank) Uncharacterized HTH-type transcriptional regulator ybbH
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_2812 (ybbH_3)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
Other families
SAMEA4384070_2812 (ybbH_3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_24
MarR
HTH_Tnp_ISL3
Penicillinase_R
HTH_29
LigT_PEase
HTH_Crp_2
MarR_2
TrmB
HTH_23
Motif
Other DBs
NCBI-ProteinID:
SNW02493
UniProt:
A0A240C5C4
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All DBs
Position
1:2965434..2966324
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AA seq
296 aa
AA seq
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MSDSRYMNTLEKIQSHLELLSKSERKVAEVILASPQTAIHSSIATLARMADVSEPTVNRF
CRRLETKGFPDFKLHLAQSLANGTPYVNRNVEEDDSVDSYTSKIFESVMASLDTVKANLD
IAAINRAVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYFDDIVMQRMSCMNSG
EGDVVVLISHTGRTKNLVEMAHLARENDATVIAITSRDTPLAQAATLALLLDVPEDTDVY
MPMVSRIAQLTLIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKGVMIPNSFDS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactcccgttatatgaatacgctggaaaaaatccagagccatctggagctcctg
agcaaatctgaaaggaaagtcgccgaggtgatcctggcctccccgcagaccgccatccac
tccagcatcgccacgctggctcgcatggccgacgtgagcgagccaaccgtcaatcgcttt
tgtcgccgcctggagaccaaaggcttccccgatttcaaactgcaccttgcccaaagcctg
gctaacggcaccccctacgtaaaccgcaacgtagaggaagatgacagcgtcgattcctat
accagtaaaatcttcgaatcggtcatggccagtctggatacagtaaaggcaaatttggat
attgccgcaatcaatcgtgcggttgacctgctcacccaggcgaaaaagatctctttcttc
ggtctgggcgcctcggcggcggtggctcacgacgcgatgaacaaatttttccgctttaac
atcccggtggtgtatttcgacgatatcgtgatgcagcgcatgagctgcatgaactccggc
gaaggcgacgtggtggtgctcatttcccacaccggccgcaccaagaacctggtggaaatg
gcgcatctggcgcgtgaaaacgacgccacggtgatcgccatcacctcgcgcgatacgcct
ttggcgcaggcggccaccctcgccctgctgctcgacgtgccggaagataccgacgtttat
atgccgatggtgtcgcggatcgcgcaattaacgctcattgacgtgctggccaccggattt
accttgcgcagaggggctaaattcagagataacttgaagcgggtcaaggaagcgctcaaa
gaatcgcgctttgataagggcgtgatgatccccaacagttttgactcgtaa
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