Serratia ficaria: SAMEA4384070_2953
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Entry
SAMEA4384070_2953 CDS
T06444
Symbol
fliA
Name
(GenBank) Sigma-F factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
sfj
Serratia ficaria
Pathway
sfj02020
Two-component system
sfj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMEA4384070_2953 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAMEA4384070_2953 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfj03021
]
SAMEA4384070_2953 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sfj02035
]
SAMEA4384070_2953 (fliA)
Transcription machinery [BR:
sfj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMEA4384070_2953 (fliA)
Bacterial motility proteins [BR:
sfj02035
]
Flagellar system
Flagellar assembly proteins
Stator
SAMEA4384070_2953 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0147
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
SNW02762
UniProt:
A0A240C595
LinkDB
All DBs
Position
1:complement(3123601..3124323)
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AA seq
240 aa
AA seq
DB search
MSFLYTAEGVMDKNSLWLRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRHAREVAQAMRQLEQRHGRPASEVEV
AQALDISLDEYRQILLDTNNSQLFSYDEWREEHGESAEPLLEGHEEANPLHHLLEGSLRQ
RVIDAIEALPEREKMVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRARLANAS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagctttctgtataccgccgaaggcgtgatggacaaaaattctctttggctgcgctac
gtgccgttggtgcgccacgaggcgttgcgcctgcaggtcaggctgcccgccagcgtggag
ctcgacgatctgctgcaggccggaggaatcgggctgttgaacgccgtcgagcgttacgac
gccctgcagggaaccgcctttaccacctacgcggtgcagcgcatccgcggcgcgatgctc
gacgagctgcgcagccgcgactgggtgccgcgcagcgtgcggcgccacgcgcgtgaagtg
gcgcaggcgatgcggcagctggaacagcgccatggccgcccggccagcgaagtggaagtg
gcgcaggcgctggatatctcactggacgaataccgtcaaattctgttggacaccaataac
agccagcttttctcctatgacgagtggcgcgaagagcacggcgaaagcgcggagcccctg
ctggaagggcatgaggaagccaacccgctgcaccatctgctggagggcagcctgcgccaa
cgggtgatcgacgccatcgaggcattgccggaacgcgagaaaatggtgctgacgctgtat
taccaggaagagttgaacctgaaggagatcggcgccgtgctggacgtgggcgagtcccgc
gtcagccagctgcacagccaggcgatcaaacgcctgcgggcgcggttggcgaatgcgtcc
tga
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