KEGG   Serratia ficaria: SAMEA4384070_2996
Entry
SAMEA4384070_2996 CDS       T06444                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
sfj  Serratia ficaria
Brite
KEGG Orthology (KO) [BR:sfj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sfj03016]
    SAMEA4384070_2996 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sfj02048]
    SAMEA4384070_2996 (vapC)
Transfer RNA biogenesis [BR:sfj03016]
 Prokaryotic type
  tRNA degradation factors
   SAMEA4384070_2996 (vapC)
Prokaryotic defense system [BR:sfj02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    SAMEA4384070_2996 (vapC)
SSDB
Motif
Pfam: PIN DUF5615
Other DBs
NCBI-ProteinID: SNW02850
UniProt: A0A240C4L4
LinkDB
Position
1:complement(3160479..3160877)
AA seq 132 aa
MFSHMLDTNIVIYVIKRRPLEVLEAFNRYAGKMVISSVTYGELVHGVEKSSRPAVNARVV
EDFVSRLDILDYGAKAASHYGNIRAALERQGTPIGVNDLHIAGHARSEGLILVTNNRREF
ERVDGLRLENWL
NT seq 399 nt   +upstreamnt  +downstreamnt
atgttcagccatatgctggacaccaacattgttatctatgtcatcaagcgccggcctctg
gaagtgctggaggcgttcaatcgctatgcgggcaaaatggtcatttcgtcggtcacctat
ggcgaattggttcacggagtggagaaaagctcgcgtccggcggttaacgcgagagtggtt
gaggattttgtctcccgattggacattctcgattacggcgccaaagcggcttcgcactac
ggcaacattcgggctgcgctggagcgtcagggaacgcctattggcgtaaacgatctgcat
atcgctgggcatgcgcgcagcgaaggattgattctggtgaccaataaccgacgcgaattt
gagcgcgttgatggcttacggctggaaaattggctgtaa

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