Serratia ficaria: SAMEA4384070_3279
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Entry
SAMEA4384070_3279 CDS
T06444
Symbol
livH_5
Name
(GenBank) LIV-I protein H
KO
K01998
branched-chain amino acid transport system permease protein
Organism
sfj
Serratia ficaria
Pathway
sfj02010
ABC transporters
sfj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA4384070_3279 (livH_5)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA4384070_3279 (livH_5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfj02000
]
SAMEA4384070_3279 (livH_5)
Transporters [BR:
sfj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SAMEA4384070_3279 (livH_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF3382
DUF6097
Motif
Other DBs
NCBI-ProteinID:
SNW03398
UniProt:
A0A240C8J6
LinkDB
All DBs
Position
1:complement(3457779..3459065)
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AA seq
428 aa
AA seq
DB search
MSQSVMNSGLDIKRSLLDAVLAGLIALIVFGPIVGIVLNGYSFNVEPHRLVWIIAAVAAG
RLLLSLFLQTASGRKVLARFDGGNDGVYVRPLGYKSSLRWIIPLMAAIALLFPFIATKYL
LTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWAMLPLG
ALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWMSLTGGPNGISVPAPTLFG
LEFGRRAKDGGVPIHEFLGITYNPNLKFVFIYAVLFLVVLLVLYIKHRLTRMPIGRAWEA
LREDEIACRSLGLNHVLVKLSAFMLGASTAGLAGVFFATYQGFVNPTSFTFFESALILAI
VVLGGMGSTIGVVLAAFVLTVAPELLRSFAEYRVLLFGVLMVAMMIWRPRGLVRISRASF
AARKGVAP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatctgtcatgaattccgggctggatattaaacgcagcctgttggacgccgta
ttggccgggctgatcgccctgatcgtgttcgggccgatcgtcggcatcgtgctgaacggc
tacagctttaacgtcgaaccgcaccggctggtgtggatcatcgcggcggtggcggcgggg
cgtttgctgctgagcctgttcctgcaaaccgcctccgggcgcaaggtgctggcgcgcttc
gacggcggcaacgacggcgtatacgtgcggccgctgggctacaagtccagcctgcgctgg
atcatcccgctgatggcggcgatcgcgctgctgtttcccttcatcgccaccaaatacctg
ctgacggtggcgatcctcgggctgatctacgtgctgctcgggctggggctgaacatcgtg
gtcgggttggccgggctgctggatctgggctacgtggcgttttacgccatcggcgcctac
gggctggcgctgggctaccagtatctggggctggggttctgggcgatgctgccgctgggg
gcgctgatggcggcgctggcgggcgcgctgctgggtttcccggtgctgcgcatgcacggc
gattatctggccatcgtcaccctggggttcggcgaaatcatccggctggtgctgaacaac
tggatgtcgctgaccggcggccccaacggcatctcggtgccggcgccgaccctgttcggc
ctggagttcggccggcgggccaaggacggcggcgtgccgatccacgagttcctcggcatc
acctataaccccaacctgaagttcgtctttatctacgcggtgctgttcctggtggtgctg
ctggtgctgtacatcaagcaccgcctgacgcgcatgccgatcggccgcgcctgggaagcg
ctgcgcgaagacgagatcgcctgccgctccctcggcctgaaccacgtgctggtgaagctg
tcggcctttatgctcggcgcctccaccgccgggctggccggggtgtttttcgccacctat
caggggttcgttaacccgacctcgttcaccttcttcgaatcggcgctgatcctggcgatc
gtggtgctcggcggcatgggctcaaccatcggcgtggtgctggcggccttcgtgctgacg
gtggcgcccgaactgctgcgcagcttcgccgaataccgggtgctgctgttcggcgtgttg
atggtggcgatgatgatctggcggccgcgcgggctggtgcgcatcagccgcgccagcttc
gccgcccgcaagggggtggcgccatga
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