Serratia ficaria: SAMEA4384070_3379
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Entry
SAMEA4384070_3379 CDS
T06444
Symbol
ompC
Name
(GenBank) Porin OmpC
KO
K09475
outer membrane pore protein C
Organism
sfj
Serratia ficaria
Pathway
sfj01501
beta-Lactam resistance
sfj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMEA4384070_3379 (ompC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMEA4384070_3379 (ompC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfj02000
]
SAMEA4384070_3379 (ompC)
Transporters [BR:
sfj02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMEA4384070_3379 (ompC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
Motif
Other DBs
NCBI-ProteinID:
SNW03583
UniProt:
A0A240C8I1
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All DBs
Position
1:complement(3577254..3578366)
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AA seq
370 aa
AA seq
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MKLRVLSLMVPALLVAGTAGAAEIYNKDGNKLDLFGKIDGLHYFSDDNGSDGDQSYMRFG
LRGETQISDQLTGYGEWEYQANLNRAESEDNNNFTRVGFAGLKFGDYGSLDYGRNYGVLY
DIGAWTDVLPEFGGDTYGADNFMFQRANGVLTYRNNDFFGLVDGLSFALQYQGKNDSATE
SNNGRDVLAQNGDGYGMSATYDLGYGISAAAAYFSSDRTNEQNGNNNPGILGRGDKADAY
SGGLKYDANNVYLAAMYTQSYNATRFGSSGSTTYGYANKAQNVEIVAQYQFDFGLRPSVA
YLQSKGKDIDRGWGDQDLMKYVDVGATYYFNKNMSTYVDYKINLLDDSDFTKSAGINTDD
VVAVGLVYQF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcgagtactctccctgatggtacccgcactgctggttgcaggcacggctggc
gcggcggaaatctacaacaaagacggtaataaactggatttgttcggtaaaatcgatggt
cttcactatttctccgatgataacgggtccgacggcgaccagtcttatatgcgtttcggc
ctgcgtggcgaaactcagatcagcgaccaactgaccggttacggcgagtgggaatatcag
gcaaacctcaaccgcgctgaaagcgaagacaacaacaacttcacccgcgttggctttgcg
ggcctgaagtttggcgattacggctctctggactacggccgtaactatggcgtgctgtac
gacatcggtgcatggaccgacgttctgcctgagttcggcggcgacacctacggcgcggac
aacttcatgttccaacgcgctaacggcgtgctgacctaccgcaacaacgacttcttcggt
ctggtggacggcctgagctttgccctgcagtatcagggtaaaaacgacagcgccaccgag
tccaacaatggccgtgacgtgctggcgcagaacggcgacggttacggcatgtccgcgacc
tacgacctgggctacggcatcagcgccgcggcggcttacttctcttccgaccgtaccaac
gagcagaacggcaacaacaacccgggcatcctggggcgcggcgacaaggctgacgcctac
agcggcggtctgaaatatgacgccaacaacgtctacctggcggcgatgtacacccagtct
tacaacgccacccgcttcggcagcagcggcagcaccacctacggctacgccaacaaagcg
cagaacgttgaaatcgtggcgcagtaccagttcgacttcggcctgcgtccttccgtggct
tacctgcagtctaaaggcaaagacatcgaccgcggctggggcgaccaggatctgatgaaa
tatgttgacgtgggcgcgacctactacttcaacaaaaacatgtccacctatgttgactac
aaaatcaacctgctggacgacagcgacttcaccaaatccgccggcatcaacaccgacgac
gtggttgccgtgggcctggtttaccagttctaa
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