Serratia ficaria: SAMEA4384070_3385
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Entry
SAMEA4384070_3385 CDS
T06444
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfj03032
]
SAMEA4384070_3385 (gyrA)
03400 DNA repair and recombination proteins [BR:
sfj03400
]
SAMEA4384070_3385 (gyrA)
Enzymes [BR:
sfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAMEA4384070_3385 (gyrA)
DNA replication proteins [BR:
sfj03032
]
Prokaryotic type
DNA Topoisomerases
SAMEA4384070_3385 (gyrA)
DNA repair and recombination proteins [BR:
sfj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMEA4384070_3385 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
SNW03593
UniProt:
A0A240C8I7
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All DBs
Position
1:complement(3586903..3589551)
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AA seq
882 aa
AA seq
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MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLSEVINGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSLTQLQVTFGINMVALHQGQPKLLNLKDILQAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV
SAMLERAGDDAARPEWLEPEFGIRDGKYFLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLNFIAELIFILESPDRLMEVIREELVAIKEQYNDGRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQVRSMGRTATG
VRGINLGEGDSVISLIVPRGEGDILTVTQNGFGKRTAVTEYPTKSRATQGVISIKVSERN
GQVVGAVQVETTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDSLEPGAEAAEEDATPLDDGDDADIADDADDDNA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtaaacatcgaagacgagttgaaaaactcg
tatctggactacgcgatgtccgttattgtcggacgtgcgctgccagatgttcgtgatgga
ctgaagccggttcaccgccgcgttctgtacgcgatgagtgtattgggtaacgactggaat
aaaccatacaagaaatcggcccgtgtcgtcggggacgtgatcggtaaataccacccgcac
ggtgacagcgcggtttacgacaccatcgtgcgtatggctcagccgttttcactgcgttac
atgctggtggacggtcagggtaacttcggttccgtcgacggcgactccgccgcggcgatg
cgttataccgaagtgcgcatgtccaagattgctcacgaactgctggcggatctggaaaaa
gaaaccgtcgacttcgtgcctaactacgatggcaccgagcagatcccggccgttatgccg
accaagatcccgaacctgctggtcaacggctcgtcgggcatcgccgtgggcatggccacc
aacattccgccgcataacctgtcagaggtcatcaacggctgcctggcctacatcgatgat
gaaaacatcagcatcgaaggcctgatggaacacattccggggccggacttcccgacggcg
gcgatcatcaacggccgccgcggcatcgaagaggcctaccgcaccgggcgcggtaaagtc
tacctgcgcgcgcgcgcggaagtggaagccgacgccaaaaccggtcgcgaaaccatcatc
gttcacgagatcccgtatcaggtgaacaaggcgcgtctgatcgagaagatcgccgagctg
gtgaaagaaaaacgcgtcgaaggcatcagcgcgctgcgcgatgaatccgacaaagacggc
atgcgcatcgtcatcgaagtcaaacgcgacgcggtgggcgaggtggtgctgaacaacctg
tactcgctgacccagctgcaggtgaccttcggcatcaacatggtggcgctgcatcagggc
cagccgaagctgctgaacctgaaagacattctgcaggccttcgtgcgtcaccgccgtgaa
gtggtgacccgccgtaccatcttcgagctgcgtaaagcccgcgatcgcgcccatatcctg
gaagcgctggccatcgcgctggccaacatcgacccgatcatcgaactgatccgtcgcgcg
ccgaccccggcggaagccaaggtggcgttggtagcccagccgtgggatctcggcaacgtc
agcgccatgctggaacgcgccggcgacgacgccgcccgcccagagtggctggagccggag
ttcggcatccgcgacggcaagtatttcctgaccgagcaacaggcgcaggcgatcctggat
ttgcgtctgcagaaactgaccggcctggagcacgaaaagctgctggacgaatataaagag
ctgctgaactttatcgctgagctgatctttattctggaaagcccggaccgcctgatggaa
gtgatccgcgaagagctggtggccatcaaagagcaatacaacgacggccgccgcaccgaa
atcaccgccaatacctcagacatcaatatcgaagacctgatcaatcaggaagacgtggtg
gttacgctgtcgcaccagggctatgtgaaatatcagccgctgtccgactacgaagcccag
cgccgcggcggcaaaggcaagtcagccgcccgcatcaaggaagaagactttatcgatcgc
ctgctggtggccaacacccacgatacgatcctgtgcttctccagccgtggccgcctgtac
tggatgaaggtgtatcaattgcctgaagccagtcgcggcgcgcgcggtcgccctatcgtc
aacctgctgccgctggaagccaacgagcgcattaccgccattctgccggtgcgcgagtat
gaggaagggcgccacgtgtttatggcgaccgccagcggcaccgtgaagaaaaccgcgctg
accgagttcagccgtccgcgcagcgccggcatcatcgccgttaacctcaacgagggcgac
gagctgattggcgtcgatctgaccgacggcagcaacgaagtgatgctgttctccgccaac
ggtaaagtggtgcgcttcccggaaacgcaggtgcgttcgatgggccgtaccgccaccggc
gtgcgcggcatcaacctgggcgaaggcgacagcgtgatctcgctgatcgtgccgcgcggt
gaaggcgatatcctgaccgtgacccagaacggcttcggtaaacgcaccgcggtcaccgag
tacccgaccaaatcgcgcgccacccagggggttatctccatcaaggtgagcgagcgcaac
ggtcaggtggttggcgccgtgcaggtggaaaccaccgatcagatcatgatgatcaccgat
gccggtacgctggtgcgcacccgggtgtcggaagtcagcgtggtgggccgtaatacccag
ggcgtgacgctgatccgcactgcggaagacgagaacgtggtcggcctgcagcgcgtagcc
gagccggtggaagacgaagagctggacagtcttgagccgggcgcggaagcggcggaagaa
gacgcgacgccgctggacgacggcgacgatgcggatatcgcagatgatgcagatgatgac
aacgcctaa
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