Serratia ficaria: SAMEA4384070_3685
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Entry
SAMEA4384070_3685 CDS
T06444
Symbol
ydfH_3
Name
(GenBank) Uncharacterized HTH-type transcriptional regulator ydfH
KO
K22293
GntR family transcriptional regulator, rspAB operon transcriptional repressor
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_3685 (ydfH_3)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SAMEA4384070_3685 (ydfH_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
Imm49
T5orf172
MUG113
Fe_dep_repress
TrmB
Rrf2
HTH_Crp_2
HTH_24
HTH_11
Motif
Other DBs
NCBI-ProteinID:
SNW03977
UniProt:
A0A240C7K8
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All DBs
Position
1:3906900..3907586
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AA seq
228 aa
AA seq
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MSETYSLTNTVPVNQQIYRFLRKDIVDCSIPPGTLLSEKEISTRFNVSRQPVREAFIKLA
EAGLVQILPQRGTFVMKISAKRVADGRFIRQAVECAIVRRVAQRITPEQLMTLEHNLHRQ
ELAAQNRQTREFLALDDAFHQLLTQFADCPLAWETIETIKATMDRVRFLSLSEVSPPESL
IQQHYRIYAALKAQDADAAERAIHEHLQEMIYSITPIALQNTEWFEAE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacgtacagtctcaccaacaccgtcccggtcaaccagcagatctaccgtttc
ctgcgcaaggatattgtcgactgcagcattcctcccggcaccctgctgtccgagaaagag
atctccacccgtttcaacgtttcgcgccagccggtgcgcgaggcctttatcaagctggcg
gaagccgggctggtgcagatcctgccgcagcgcggcaccttcgtgatgaagatctccgcc
aagcgggtggccgacgggcgttttatccgccaggcggtggagtgcgccatcgtgcgccgc
gtggcgcagcgcatcacgcccgaacagctgatgacgctggagcataatctgcatcgccag
gagctggcggcgcagaaccggcaaacgcgcgaatttctggcgctggacgacgcgttccac
cagctgctgacccagttcgccgactgcccgctggcctgggaaaccatcgaaaccatcaag
gccaccatggaccgggtgcgcttcctcagcctgagcgaggtctcgccgccggaaagcctg
atccagcaacattaccgcatttacgcggcgctgaaggcgcaggacgcggatgccgccgag
cgcgccatccacgagcatctgcaggagatgatctattcgatcacgccgatcgccctgcag
aacaccgagtggttcgaggcagaataa
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