Serratia ficaria: SAMEA4384070_3754
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Entry
SAMEA4384070_3754 CDS
T06444
Symbol
ydcU
Name
(GenBank) Inner membrane ABC transporter permease protein ydcU
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
sfj
Serratia ficaria
Pathway
sfj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA4384070_3754 (ydcU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfj02000
]
SAMEA4384070_3754 (ydcU)
Transporters [BR:
sfj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SAMEA4384070_3754 (ydcU)
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
SNW04165
UniProt:
A0A240C889
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All DBs
Position
1:complement(3976700..3977644)
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AA seq
314 aa
AA seq
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MEMSIEYPAARRGKVRALSTWLYRRPTLYLLLLLVPPLLWFGAVYLGSLLTLLWQGFYTF
DDFTMAVTPDLTLANLSALFNPANYDIILRTLTMAVLVSLASAVLAFPIAYYMARYTSGR
TKAFFYIAVMMPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLAAVLTLPGLGGNT
LSTSGLGRFLVFVYIWLPFMILPIQAALERLPPSLLHASADLGARPAQTFRHVILPLAVP
GIAAGSIFTFSLTLGDFIVPQLVGPPGYFIGSMVYAQQGAIGNMPMAAAFTLVPIVLIAI
YLAIVKRLGAFDAL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgagcatcgaatatcctgcggcgcgccgcggtaaagtgcgcgcactctcgacc
tggctttatcgccgcccgacgttgtatctgctgctgttgctggtgccgccgctgctgtgg
ttcggcgcggtgtacctcggttcgctgctgacgctgctgtggcaggggttctacaccttc
gacgatttcactatggcggtgacgcctgatctgaccctggcgaacctcagcgcgctgttc
aacccggccaactatgacatcattctgcgcaccctcaccatggcggtgctggtatcgctg
gccagcgcggtgctggcgttcccgatcgcttactacatggcgcgttacaccagcggccgc
accaaggcgtttttttacatcgcggtgatgatgccgatgtgggccagctatatcgtcaaa
gcctatgcctggacgttgctgctggcgaaggatggcgtggcgcagtggttcttgcagcac
cttggtttggaaccgttgctggcggccgtcctgacgctgcccggcctcggcggcaatacc
ctgtcgacctcggggctggggcgttttctggtgttcgtctacatctggctgccgttcatg
atcctgccgatccaggcggcgctggaacgcctgccgccttcgctgctgcatgcctctgcg
gatctgggcgcccgcccggcgcagaccttccgccatgtgatcctgccgctggcggttcct
ggcattgccgccggttcgatcttcaccttctcgctgacgctgggcgactttatcgtgccg
cagctggtggggccgccgggttactttatcggcagcatggtgtatgcccagcagggggcg
atcggcaacatgccgatggcggccgcctttaccctggtgccgatcgtcctgatcgctatc
tatcttgccatcgtgaaacgtctgggggccttcgatgcactctga
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