Serratia ficaria: SAMEA4384070_3832
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Entry
SAMEA4384070_3832 CDS
T06444
Symbol
gabR_2
Name
(GenBank) HTH-type transcriptional regulatory protein gabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_3832 (gabR_2)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SAMEA4384070_3832 (gabR_2)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_36
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
SNW04362
UniProt:
A0A240C9V9
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All DBs
Position
1:complement(4052838..4054271)
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AA seq
477 aa
AA seq
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MMRQFLSSLRLDSRLAEPLYRQIYLRIKDGIERGALAAGSRLPSVRGLASDLGVARATVE
SAYGQLIAEGFLQSRGQAGTYVSPQLRPLPQGGASPAQPLPMPVADPLHPQGMLQPFQLG
LPALDAFPRAQWQRIVSRLLRSATAASLALPPANGQPELREAIANYLHLSRGIRCQPEQV
FICAGYPAMLDLVLDTLLQPGDEAWLEDPGYPVTLPLLRAAGMRAVAVPVDGQGMAVAAG
IAAAPRARLAIVTPTHQSPLGVSLSLARRMALLDWAQRRSAWIFEDDYDSEFRYHGRPLP
PLKSLDRQGRVLYAGTFSKTLFPALRMAYLVVPAGLTEAFARTSRLRGCGCSPLLQAGVA
DFINQGHFYRHLKRMRPLYRERREWLAQALERQLGAHLTVAPQPGGIQLLVRLRDEGQDA
RLAARAWRQGLAVQALSDWRITPGAGQGLLLGFANFTRREEAERAVARLQALFDGAN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgccaattcctttcctctctgcggctggacagtcggctggccgaaccgctgtac
cggcagatttatctgcggataaaagacggcatcgaacggggcgcgctggcggcgggcagc
cgcctgccgtcggtgcgcgggttggccagcgatctgggcgtggcgcgcgccacggtggaa
agcgcttacggtcagctgatcgccgaaggttttttgcaaagccgcgggcaggcgggtacc
tatgtctcgccgcagctgcggcctttgccgcagggcggcgcgtcgccggcgcagccattg
ccgatgccggtggccgatccgctgcatccccagggtatgctgcagccgttccagctgggc
ctgccggcgctggacgcctttccgcgcgcgcagtggcagcgtatcgtctcccgcctgctg
cgcagcgccaccgccgcctcgctggcgctgccgccggccaatggccagccggaactgcgc
gaggcgatcgccaattacctgcacctgtcgcgcggcattcgctgtcagccggaacaagtc
ttcatctgcgccggttacccggccatgttggatctggtgctcgacaccttgctgcagccg
ggggatgaggcgtggctggaggatcccggctacccggtgacgttgccgctgttgcgcgcc
gccggcatgcgggcggtggcggtgccggtcgatgggcaggggatggcggttgccgccggc
atcgccgcggcgccgcgggcgcgcctggcgatagtgacgccgactcaccaaagcccgctc
ggggtgtcgctcagcctggcgcggagaatggcgctgctggactgggcgcagcggcgttcg
gcatggattttcgaggatgactacgacagcgagttccgctatcacgggcggccgctgccg
ccgctgaaaagcctcgatcgccaggggcgagtgctgtatgccggcaccttcagcaaaacc
ttgttcccggcgctgcgcatggcttacctggtggtgccggccgggctgacggaggcgttc
gcccgcaccagccggctgcgcggctgcggctgttcgccgctgctgcaggccggcgtggcg
gatttcatcaatcaggggcacttctaccgccacctcaagcgcatgcggccgctgtatcgg
gaacggcgtgaatggctggcgcaggcgctggagcggcaactgggcgcgcatttgacggtg
gcgccgcaacccggcggcattcagctgctggtgcgcctgcgcgacgaggggcaggatgcg
cggctggcggcgcgggcctggcggcaggggttggcggtgcaggcgctgtcggactggcgg
ataacccccggggcggggcaggggttgttgctggggttcgccaattttaccaggcgcgaa
gaggccgagcgggcggtggcgcgtttgcaagccctgttcgacggcgcaaattaa
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