Serratia ficaria: SAMEA4384070_3891
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Entry
SAMEA4384070_3891 CDS
T06444
Symbol
lpxB
Name
(GenBank) Lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
sfj
Serratia ficaria
Pathway
sfj00540
Lipopolysaccharide biosynthesis
sfj01100
Metabolic pathways
Module
sfj_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA4384070_3891 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfj01005
]
SAMEA4384070_3891 (lpxB)
Enzymes [BR:
sfj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
SAMEA4384070_3891 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
sfj01005
]
Lipid A
SAMEA4384070_3891 (lpxB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
DUF6986
Motif
Other DBs
NCBI-ProteinID:
SNW04507
UniProt:
A0A240C952
LinkDB
All DBs
Position
1:complement(4117094..4118242)
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AA seq
382 aa
AA seq
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MPNRPLTIGLVAGETSGDILGAGLIRALKAQIPDARFVGVAGPLMQAEGCEAWYEMEELA
VMGVVEVLERLPRLLKIRKDLTRRFSELRPDVFVGIDAPDFNITLEGRLKQRGIRTIHYV
SPSVWAWRQKRVFKIGKATDLVLAFLPFEKAFYDRFNVPCRFIGHTMADAMPLQPDRLAA
RAELGIDPQARCLALLPGSRGAEVEMLSADFLKTAQLLRTRYPDLEVVVPLVNAKRREQF
ERIKAEVAPELTVHLLNGQGREAMVASDAALLASGTAALECMLAKCPMVVGYRMKPFTFW
LAQRLVKTPYVSLPNLLAGREIVTELLQHDCVPDKLAAALMPLLEDSPQTETLKQTFLTL
HQSIRCGADEQAAQAVLELAKA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatcgcccattgactatcggattggtcgccggagaaacctccggtgatattctc
ggcgccggtttaatccgcgcgctcaaggcgcagattcccgacgcgcgttttgttggcgtc
gccggcccgctgatgcaggccgaagggtgtgaagcctggtacgaaatggaagagctggcg
gtgatgggcgtggtggaagtgctggaacgtttgccgcgcctgttgaagatccgcaaggat
ctgacccggcgcttcagcgaattgcgaccggacgtgtttgtcggcatcgacgcgccggac
ttcaacatcacgctggaaggccgcctaaagcagcgcggcattcgcaccattcactatgtc
agcccgtcagtttgggcctggcgccaaaagcgcgttttcaaaattggcaaagccaccgat
ctggtgctggcttttctccctttcgaaaaagcgttttacgatcgcttcaacgttccctgt
cggtttatcggccacaccatggcggacgccatgccgctgcagccggataggctggcggcg
cgcgccgagctgggcatcgacccgcaggcccgctgcctggcattgctgcccggcagccgc
ggtgccgaagtcgagatgctgagcgccgatttcctgaaaaccgcgcagctgctgcgcacc
cgctatccggatctggaagtggtggtgccgctggtcaacgccaagcggcgcgagcagttc
gaacgcatcaaggccgaggtggcgccggagctgaccgtgcatctgctgaacgggcagggg
cgcgaggcgatggtggccagcgacgcagccttgctggcgtcgggcaccgccgcgctggag
tgcatgctggccaaatgtccgatggtcgtcggctaccggatgaagccgtttaccttctgg
ctggcgcagcggctggtgaagaccccttacgtctcgctgcccaacctgctcgccggccga
gaaatcgtcaccgaactgctgcagcacgactgcgtgccggacaagctggccgccgcgctg
atgccgctgctggaagacagcccgcaaaccgaaacgctgaagcagaccttccttaccttg
caccaaagcatccgttgcggtgccgatgaacaggccgctcaggctgtgttggagctggcg
aaagcatga
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