Serratia ficaria: SAMEA4384070_3919
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Entry
SAMEA4384070_3919 CDS
T06444
Symbol
ygdH
Name
(GenBank) LOG family protein ygdH
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
sfj
Serratia ficaria
Pathway
sfj00230
Purine metabolism
sfj00240
Pyrimidine metabolism
sfj01100
Metabolic pathways
sfj01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SAMEA4384070_3919 (ygdH)
00240 Pyrimidine metabolism
SAMEA4384070_3919 (ygdH)
Enzymes [BR:
sfj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
SAMEA4384070_3919 (ygdH)
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Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Glycos_transf_2
Motif
Other DBs
NCBI-ProteinID:
SNW04585
UniProt:
A0A240C9F4
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All DBs
Position
1:4150793..4152157
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AA seq
454 aa
AA seq
DB search
MITHISPLGSMDLLSQLEVDMLKRTASSDLYRLFRNCSLAVLNSGSQTDNSKQLLSRYET
FDINVLRRERGVKLELVNPPEDAFVDGRIIRSLQANLFAVLRDILFVHGQIDSAGSFQHL
NLENSAHITNLVFSILRNARALHLDEDPNMVVCWGGHSINENEYLYARKVGSQLGLRELN
ICTGCGPGAMEAPMKGAAVGHAQQRYHNSRFIGMTEPSIIAAEPPNPLVNELVIMPDIEK
RLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPENSEQVLPLILTGPKESADYFRVLD
EFIMNTLGDEARRHYSIIIDDPAEVARQMKKAMPLVKENRRNTGDAYSFNWSIRIAPDLQ
LPFEPTHENMANLNLYPDQPAEQLAAALRRAFSGIVAGNVKENGIHAIEQFGPYKLHGEP
QMMKQMDSLLQGFVAQHRMKLPGSAYVPCYEIVA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgattacacacatcagcccgcttggctctatggatttgttgtcgcagctggaagtagac
atgctgaagcgcaccgccagcagcgacctgtaccgcctgttccgcaactgttcgctggcc
gtgttgaactccggcagccagaccgacaacagcaaacagctgttgtcccgctatgaaacc
tttgatatcaacgtgctgcgccgcgagcgcggggtgaagctggagctggtcaacccgccg
gaagacgctttcgtcgacggccgcattatccgctcgctgcaggccaacctgttcgccgtg
ctgcgcgacatcctgttcgtgcacggccagatcgacagcgccggcagtttccagcacctg
aacctggaaaactcggcccatatcaccaacctggtgttctccatcctgcgcaatgcccgc
gcgctgcatctggacgaagatcccaacatggtggtgtgctggggcggccactcgatcaac
gaaaacgaatacctctatgcgcgcaaggtcggcagccagctgggcctgcgcgagctgaac
atctgcaccggctgcgggccgggcgcgatggaagcgccgatgaagggcgcggcggtcggc
catgcgcagcagcgctaccacaacagccgctttatcggcatgaccgaaccttcgatcatc
gccgccgagccgcctaacccgctggtcaacgagctggtgatcatgccggacatcgaaaag
cgcctggaggccttcgtgcgcatcgcccacggcatcatcatcttcccgggcggcgtcggc
acggcggaagagttgctgtacctgctgggcatcctgatgaatccggagaacagcgagcag
gtgctgccgctgatcctgaccgggccgaaagagagcgccgattacttccgcgtgctggat
gagttcatcatgaatacgctgggcgacgaggcacgccgccactacagcatcatcatcgat
gacccggcggaggtggcgcgtcagatgaaaaaagccatgccgttggtgaaggaaaaccgc
cgcaacaccggcgacgcctacagcttcaactggtcgatccgcatcgcgccggatctgcag
ctgccattcgagccgacccatgaaaacatggccaatctcaacctgtacccggatcaaccg
gcggagcagctggccgctgcgctgcggcgcgcgttctccggcatcgtggccggcaacgtg
aaggaaaacggcattcacgccatcgagcagttcggcccttacaagctgcacggcgaaccg
cagatgatgaagcaaatggacagcctgctgcagggcttcgtcgcccagcaccgcatgaag
ctgccgggcagcgcctacgtgccctgctatgaaatcgtagcctga
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