Serratia ficaria: SAMEA4384070_4107
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Entry
SAMEA4384070_4107 CDS
T06444
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase precursor
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sfj
Serratia ficaria
Pathway
sfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4384070_4107 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfj03019
]
SAMEA4384070_4107 (pcnB)
Enzymes [BR:
sfj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SAMEA4384070_4107 (pcnB)
Messenger RNA biogenesis [BR:
sfj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SAMEA4384070_4107 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
SNW04966
UniProt:
A0A240CCI8
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All DBs
Position
1:4356832..4358148
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AA seq
438 aa
AA seq
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MTVIPREQHSISRKDISENALKVLYRLNKSGYEAYLVGGGVRDLLLGKKPKDFDITTNAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQSPESDKNSSQQAQNGMLLR
DNIFGSIEEDAQRRDFTINSLYYGVADFTLRDYVDGLRDLKQGVIRLIGDPETRYREDPV
RMLRAVRFAAKLDMTISDETAEPIPRLASLLHEIPPARLFEESLKLLQAGYGYPTYLKLC
EYQLFQPLFPLISRNFTPNHDTPMERILVQVLKNTDHRLQNDMRVNPAFLFAAMLWYPLL
EHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGKR
AHKLMEHPKFRAAYDLLALRAEVEDNPEMLRLTEWWGEFQEATPARQKAMLSTLGDDPAP
RRARQRRPRRRAPRKEGA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcatcccgcgcgaacagcattcgatctcccgcaaagacatcagcgaaaacgcg
ctgaaggtgctctaccgcctgaacaagtccggctacgaagcctatctggttggcggcggc
gtgcgtgatctgctgctgggcaagaaaccgaaagatttcgacatcaccaccaacgccacg
ccggagcaggtgcgcaagctgttccgcaactgccgcctggtcggccgccgcttccgtctg
gcgcacgtgatgttcgggccggaaatcatcgaggtcgccaccttccgcggccaccacgag
caaagcccggaatccgacaagaattcatcgcagcaagcgcaaaacggcatgctgctgcgc
gacaacatcttcggctcgatcgaagaagacgcccagcgccgcgatttcaccatcaacagc
ctgtattacggcgtggcggacttcacgctgcgggattacgtcgacggcctgcgcgatctg
aagcagggcgtgatccgcctgatcggcgatccggaaacccgctaccgcgaagatccggtg
cgcatgctgcgcgcggtgcgcttcgccgccaagctggacatgaccatcagcgacgaaacc
gccgagccgatcccgcgcctggcctcgctgctgcacgagatcccgccggcgcgcctgttc
gaagagtccctcaagctgctgcaggcgggctacggttatccgacctacctgaagctgtgc
gaataccagctgttccagccgctgttcccgctgatttcgcgcaacttcacgccaaatcac
gatacgccgatggagcgcattctggtgcaggtgttgaagaataccgatcaccgcctgcag
aacgacatgcgcgtcaatccggcgttcctgttcgccgccatgctgtggtatccgctgctg
gaacacgcgcagaagctggcgcaggaaagcggcctggcctactacgacgcctttgcgctg
gcgatgaacgatgtgctggacgaacagtgccgttcactggccattccaaaacgcatcacc
acgctggtgcgcgatatctggcagctgcagctgcgcctgtcgcgccgccagggcaagcgc
gcgcacaagctgatggaacatccgaaattccgcgccgcctatgacttgctggcgctgcgc
gccgaggtggaagacaatccggaaatgctgcgcctgaccgaatggtggggtgagttccag
gaagcgacgccggcgcgtcagaaggccatgctgagcaccctgggcgatgacccggcgccg
cgtcgcgcgcgccaacgccgtcctcgccgccgggcgccgcgcaaagaaggggcatga
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