Serratia ficaria: SAMEA4384070_4129
Help
Entry
SAMEA4384070_4129 CDS
T06444
Symbol
pdhR_1
Name
(GenBank) Pyruvate dehydrogenase complex repressor
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_4129 (pdhR_1)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SAMEA4384070_4129 (pdhR_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR
MarR_2
TrmB
HTH_11
PaaX
HTH_24
HTH_28
HTH_DeoR
HTH_41
Fe_dep_repress
HTH_Crp_2
HTH_36
HTH_10
Motif
Other DBs
NCBI-ProteinID:
SNW05003
UniProt:
A0A240CCS0
LinkDB
All DBs
Position
1:complement(4381999..4382763)
Genome browser
AA seq
254 aa
AA seq
DB search
MAYSKIRQPKLSDVIEQQLEYLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEA
KGLLLRRQGGGTFVQTNLWQSFSDPLAELLADHPESQFDLLETRHALEGIAAYYAALRGT
DEDLARIRDCHIVIQQAQDSGDLDAEADAVMQYQIAVTEAAHNVVLLHLLRCMGPMLEQN
VRQNFELLYSRREMLAKVSSHRAGIFEAIVAREPEKAREASHRHLAFIEEILLDLSREHT
RRERSLRRLQQRKD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcctacagcaaaatccgccaacccaagttgtcagacgttatcgagcagcagctcgaa
tacctgatcctcgagggaacgctgcgtccaggcgaaaagctgcctccggagcgcgagctg
gcgaaacaatttgatgtttcccgcccttctctgagagaggccatccagcgcttggaagct
aaagggctgctcctgcgccgtcagggcggcggcacctttgtacaaactaatctgtggcag
agcttcagcgatccgctggctgaactgctggccgaccatcctgaatcacaattcgatctg
ctggaaacccgtcacgcgctggaaggcattgccgcctattacgcggcgctgcgcggcacc
gatgaagatctggcgcgcatccgcgattgccacatagtgattcagcaggcccaggacagc
ggcgatctcgacgccgaagccgacgcggtcatgcagtaccaaatcgccgtgaccgaagct
gcccacaacgttgtgttgctgcacctgctacgctgcatggggccgatgctggaacagaac
gtgcgtcagaactttgaattgctctactcgcgccgtgagatgttggcaaaagtgagcagc
caccgcgccgggatttttgaggcgattgtggcacgcgagccggaaaaggcccgtgaagcc
tcgcaccgccacttggcgtttatcgaggaaatcttgctggatctcagtcgggagcatacc
cgccgcgagagatcgctacggcgtctccagcaacgcaaggattaa
DBGET
integrated database retrieval system
