Serratia ficaria: SAMEA4384070_4609
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Entry
SAMEA4384070_4609 CDS
T06444
Symbol
gntR_3
Name
(GenBank) Gluconate utilization system GNT-I transcriptional repressor
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_4609 (gntR_3)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA4384070_4609 (gntR_3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
Motif
Other DBs
NCBI-ProteinID:
SNW05924
UniProt:
A0A240CD64
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All DBs
Position
1:complement(4921020..4921958)
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AA seq
312 aa
AA seq
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MTVSRYLRNPDQVSVALQQKIAVALDELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFA
EVLRGIESVTDAHNYQTMLAHYGYLPEREEERLTSLLSYNIDGLILSERHHTPRTLKMIE
VAGIPVVELMDCVSPCIDLAVGFNNFEAARQMTQQIIAHGHRHLVYFGARQDERTIIKQQ
GYEQAMRESGLEPYSIMTARSSSYSAGGELLRQAQRDYPQIDSIFCTNDDLAIGAAFECQ
RQGLSIPHEMAIAGFHGHDIGQVMVPKLASVLTPRERMGQIGAERLLARLRGETVCPRMV
DVGFTVIPGGSI
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgagccgttatttgcgtaaccccgaccaggtttctgtcgccttgcagcaaaaa
atcgccgtcgcgctggatgagctgggttatatccccaaccgtgcgccggacattctttcc
aacgccaccagccgggcgatcggcgtgctgttgccgtcgctgaccaaccaggtgttcgcc
gaggtgctgcgcggcatcgaaagcgtgaccgacgcgcacaactaccagaccatgctggcg
cactacggctatttgccggagcgtgaagaagaacgcctgacctcgctgctgtcctacaat
atcgacggcctgatcctgtcggagcgccaccacacgccgcgcaccctgaagatgattgag
gtggcgggcattcccgtggtggagctgatggactgcgtctcgccgtgcatcgatctggcg
gtggggttcaacaacttcgaggcggcgcggcagatgacgcaacagatcatcgcccacggc
catcgtcacctggtgtacttcggcgcccgtcaggatgaacgtaccattatcaaacagcag
ggttacgaacaggcgatgcgcgagtccggcctggagccgtacagcatcatgaccgcgcgc
tcttcctcctattccgccggcggcgaactgctgcgccaggcgcagcgcgactacccgcag
atcgacagcatcttctgcaccaacgatgacctggcgatcggcgcggccttcgagtgccag
cgccaggggctgtctattcctcatgagatggcgatcgccggtttccacggccatgatatc
ggccaggtgatggtgccgaagctggccagcgtgctgacgccgcgtgagcgcatggggcaa
atcggcgccgaacgcctgctggcccggctgcgcggcgaaaccgtctgcccgcgcatggtg
gacgtcggcttcaccgtgatccccggcggcagcatctga
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