Serratia ficaria: SAMEA4384070_4724
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Entry
SAMEA4384070_4724 CDS
T06444
Symbol
cytR_4
Name
(GenBank) HTH-type transcriptional repressor CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_4724 (cytR_4)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA4384070_4724 (cytR_4)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_Crp_2
MarR_2
HTH_3
TetR_N
HTH_24
MerR
HTH_26
Motif
Other DBs
NCBI-ProteinID:
SNW06251
UniProt:
A0A240CDX9
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All DBs
Position
1:5063080..5064108
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AA seq
342 aa
AA seq
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MEHKKDLSMATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLH
QLGHKQIACVAGPEQMPLSHYRLQGYIQALRRNGISVESSYITRGDFTYEAGAQALAALM
AQPKPPTAVFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDIKLAQYCDPPLTTVAQPR
YEIGQQAMLLLLEQLHGHTVASGSRLLDSELIIRGSTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacaagaaagatttatccatggcgaccatgaaagacgtcgccgaaatggcgggc
gtttcaacggctaccgtatcgcgcgcgctgatgaacccggaaaaggtgtcaacgccgacg
cgtcagaaagtggaacaggccgtcctggccgtgggttattctcctcatgccctgtcacgc
aatatcaagcgcaatgaatctcgcaccatcctggtgatcgttcccgacatctgcgatccg
tttttcgccgatgtgatccaggggatcgagcagaccgccgcgcagcagggctatctggtg
ctgatcggcgactgcgcgcagcaaaatcagcaggagcgcaccttcgtcaatctgatcatc
accaaacagatcgacggcatgctgctgctgggctccaacctgccgttcgacgccagcaag
gaagagcagcgcaatctgccgccgatggtgatggccaacgagttcgcccccgagctggaa
ctgccgacggtgcatatcgataacctgaccgccgccttcgaggccgtgcattatttacac
cagctgggccacaagcagatcgcctgtgtcgccgggccggaacagatgccgctgagccat
tatcggctgcaaggttacattcaggcgctacgtcgtaatggcattagcgtcgaaagcagc
tatattacccggggtgattttacttacgaagccggcgctcaggcgctggcggcgttgatg
gctcagcctaaaccgcctacggccgtcttctgccacagcgacgtaatggcgatcggcgtg
ctgtcgcaggcgaaaaaaatgggcctgcgggtaccgcaggatctgtcgatagtgggtttc
gacgacatcaagctggcgcagtattgcgatccgccgttaaccacggtggctcagccgcgc
tacgagattggccagcaggcgatgctgctgctgttagagcagttgcatgggcacacggtg
gcaagcggctcgcggttgttggacagcgagttgattatcagaggcagcacggctgcccct
aaacgctag
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