Serratia ficaria: SAMEA4384070_4758
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Entry
SAMEA4384070_4758 CDS
T06444
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sfj
Serratia ficaria
Pathway
sfj00541
Biosynthesis of various nucleotide sugars
sfj01100
Metabolic pathways
sfj01250
Biosynthesis of nucleotide sugars
Module
sfj_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAMEA4384070_4758 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfj01005
]
SAMEA4384070_4758 (hldD)
Enzymes [BR:
sfj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
SAMEA4384070_4758 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
sfj01005
]
Core region
SAMEA4384070_4758 (hldD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
adh_short
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
SNW06345
UniProt:
A0A240CEM5
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All DBs
Position
1:5095519..5096448
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AA seq
309 aa
AA seq
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MIIVTGGAGMIGSNIVKALNDKGYRDILVVDNLKDGTKFVNLVDLDIADYIDKEDFIASI
MAGDDLGDIEAIFHEGACSATTEWDGKYMMDNNYQYSKDLLHYCLDREIPFLYASSAATY
GAREEFIEERQYEEPLNVYGYSKFLFDQYVREILPEADSQVCGFRYFNVYGPREGHKGSM
ASVAFHLNGQINRGENPKLFAGSENFKRDFIYVGDVAAVNLWFWETGKSGIFNCGTGRAE
SFQAVADAVVDFHQKGAVESIAFPEKLKGRYQAYTQADLTKLRAAGYDAPFKTVAEGVKE
YMAWLNRTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcacaggcggcgccggcatgatcggcagcaatatcgttaaggcactgaat
gacaagggataccgcgatatcctggtggtggataacctgaaagatggcaccaagttcgtc
aacctggtcgatcttgatatcgccgactatatcgacaaggaagattttatcgccagcatc
atggccggcgacgatctgggcgatatcgaggcgatattccacgaaggcgcctgctccgcc
accaccgagtgggacggcaagtacatgatggacaacaactatcagtactccaaggacctg
ctgcactactgcctggatcgcgagatcccattcctgtacgcctcctccgccgccacctat
ggcgcccgggaagagtttatcgaagagcgccaatacgaagagccgctcaacgtctacggc
tattccaagttcctgttcgatcagtacgtgcgcgaaatcctgccagaggccgactcgcag
gtctgcggcttccgctatttcaacgtctacggcccgcgtgaaggccacaaaggcagcatg
gccagcgtcgctttccacctgaatggccagatcaaccgcggtgagaacccgaaactgttc
gccggcagcgaaaacttcaagcgtgacttcatctacgtcggcgacgtggcggcggtcaac
ctgtggttctgggaaaccggcaagtcaggcattttcaactgcggtaccggccgggcggaa
agcttccaggcggtcgccgatgcggtggtggacttccatcagaaaggcgcggtggaatcc
atcgcgttcccggaaaagctgaagggccgctaccaggcgtatacccaggccgatctgacc
aagctgcgcgccgcgggctatgatgccccgttcaaaacggtggccgaaggcgtcaaagag
tacatggcctggttgaaccgcaccgcataa
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