Serratia ficaria: SAMEA4384070_4766
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Entry
SAMEA4384070_4766 CDS
T06444
Symbol
rfaG
Name
(GenBank) Lipopolysaccharide core biosynthesis protein rfaG
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
sfj
Serratia ficaria
Pathway
sfj00540
Lipopolysaccharide biosynthesis
sfj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA4384070_4766 (rfaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfj01005
]
SAMEA4384070_4766 (rfaG)
Lipopolysaccharide biosynthesis proteins [BR:
sfj01005
]
Core region
SAMEA4384070_4766 (rfaG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
GT4-conflict
Glyco_trans_1_2
DUF4930
DUF2325
Motif
Other DBs
NCBI-ProteinID:
SNW06371
UniProt:
A0A240CEA7
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Position
1:5103929..5105056
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AA seq
375 aa
AA seq
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MKAFRLAIVRQKYRPDGGAERFVSRALEALEQQDLDLNVITREWQGDANPNWHIHLCNPL
KLGRISRERGFAEAARALWQKERFDLVQSHERIPGCDIYRAGDGVHRRWLLQRARLLPEW
RRKWLFSNRYHRYVMCAERAMYAAPELKAVICNAEMIKQEIIDDFGVPADKITVIYNAID
NQKFLPADAERRQRLREQYQIPQRAHCLIFVGSGFERKGLAAAIRAVAATDSHLLVVGKD
KAEKRYRALAQTLGCSDRLHFMGVQKQTLPFYQAADALLLPTLYDPFPNVILEAMSCGLP
VITSTTCGGSEFIVPGQNGFVTDALDVAAITEAIRVLPRQAIGSAMGEAARLRIMSATPA
HLSEQLISLYNRLLD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatttcgtttggcgatcgttcgccaaaaataccgcccggacggcggggctgag
cgtttcgtctcacgcgccctggaggcgctggagcagcaggacctcgatctgaacgtcatc
acccgcgaatggcagggcgacgccaatcccaactggcacattcacctgtgcaacccgttg
aaactcggccgcatcagccgcgagcggggcttcgccgaagcggccagagcgctgtggcag
aaagaacgctttgacctggtgcaaagccatgaacgcatccccggctgcgacatttaccgc
gccggtgacggcgtgcatcgccgctggctgctgcagcgcgcgcgcctgctgccggaatgg
cgacgcaaatggctgttctccaaccgttatcaccgctatgtgatgtgcgcggagcgcgcg
atgtacgctgcgcccgagctaaaggcggtgatctgcaacgccgagatgatcaaacaggaa
atcatcgatgactttggcgtgcccgccgataaaatcacggtgatctataacgccatcgac
aaccaaaaattcttgcccgccgatgccgaacgacgccagcggctgcgcgagcagtatcaa
atccctcaacgggctcactgcctgatctttgtcggttccggttttgaacgcaagggcctg
gccgccgccattcgcgccgtggcggcgaccgacagccacctgctggtggtcggcaaggat
aaggccgaaaaacgctaccgggcgctggcgcagacgctgggctgcagcgatcgcctgcac
tttatgggcgtgcagaaacaaacgttgccgttttatcaggcggcggacgcgctgctgctg
ccgacgctgtacgacccctttcccaacgtgatcctggaagcgatgtcgtgcggcctgccg
gtgatcaccagcaccacctgcggcgggtccgaatttatcgtccctgggcagaacggcttc
gtcaccgacgccctcgacgttgcggccatcaccgaagcgattcgggtgctgcctcgccag
gccatcggctctgccatgggcgaagcggccaggctgcgcatcatgtcggccacgccggcg
catctctccgagcagcttatttccctgtataaccgattactggactag
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