Streptomyces formicae: KY5_0402c
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Entry
KY5_0402c CDS
T05416
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sfk
Streptomyces formicae
Pathway
sfk00300
Lysine biosynthesis
sfk00470
D-Amino acid metabolism
sfk01100
Metabolic pathways
sfk01110
Biosynthesis of secondary metabolites
sfk01120
Microbial metabolism in diverse environments
sfk01230
Biosynthesis of amino acids
Module
sfk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KY5_0402c
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KY5_0402c
Enzymes [BR:
sfk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KY5_0402c
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ATL25420
UniProt:
A0A291Q112
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All DBs
Position
complement(473597..475099)
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AA seq
500 aa
AA seq
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MTTLHVPPFPVPLPQPVAPDPVGDLSPSEPAPEPAPEPAPEPATELPSKTSSEQASGSVS
GSSSDCPSDEELSIWPASTTPLARGDLSVGGVPVTEVADRFGTPAYLLDEGEVRARCRAY
LRAFPEAEVLYAAKAFLCRAMAHWMDEEGLGLDVCSAGELELAVTTGFPAERIVLHGNAK
SPHDLAAALRLGVGRIVIDSASEIARLAAAVPTGSRQKVMVRVVPGIAAGGHVKIRTGTD
DQKFGLSLTDGSAQHAIARILGQPALELVGLHCHLGSQITTEKPFLAAVRRLVGLMARVK
DQHGVTFPELDLGGGHGIAYRPGEDALDIACLARKVRAELIESCAAAGLTVPRLIVEPGR
AIAGPSGVALYRVLAVKRTAHRTFVAVDGGMSDNPRPALYGVRYEPRLVGRSTTAEAAPV
TVVGRHCEAGDILATDVPLPGDVRPGDLLAVPVAGAYHLSMASGYNLVGRPPVVAVAEGH
ARLLVRRESLEDFRSRDVGL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccctgcacgtacctccgttccctgtaccgctccctcaaccggtggcgcccgac
cccgtcggcgacctctccccgtccgagcccgcacccgagcccgcacccgagcccgcaccc
gagcccgcgaccgagctcccgtccaagacctcgtccgagcaggcgtccggctccgtgtcc
ggctcctcgtccgactgcccgtccgacgaggagctgtccatctggcccgcctccaccacg
cccctcgcgcgcggtgacctctccgtgggcggcgtcccggtcaccgaggtcgccgatcgc
ttcggcacccccgcctatctcctggacgaaggcgaggtgcgcgcccgctgccgcgcgtac
ctgcgcgccttccccgaggccgaagtcctctacgccgccaaggcgttcctgtgccgcgcg
atggcgcactggatggacgaggagggcctgggcctggacgtctgctcggccggtgagctg
gagctcgccgtcacgaccgggttccccgccgaacgcatcgtgctgcacggcaacgccaag
agcccgcacgacctggccgccgcgctccggctcggcgtcgggcgcatcgtcatcgacagc
gcgtccgagatcgcccgtctcgccgccgccgtgccgaccggcagcaggcagaaggtgatg
gtcagggtggtgcccggcatcgcggcgggcgggcacgtcaagatccgcacgggcaccgac
gaccagaagttcggcctgtccctcacggacggctccgcgcagcacgccatcgcccgcatc
ctgggccagcccgcgctcgaactggtgggcctgcactgccatctgggatcacagatcacc
acggagaagccgttcctcgccgcggtgcgcaggctggtcggcctgatggcgcgggtcaag
gaccagcacggcgtcacgttccccgagctggacctcggcggcggccacggcatcgcctac
cgtcccggcgaggacgcgctcgacatcgcctgtctcgcccgcaaggtgcgggccgagctg
atcgagagctgcgcggcggcgggactcaccgtcccgcgcctgatcgtggagccgggccgc
gcgatcgcgggcccctccggagtggccctctaccgggtgctcgcggtgaagcgcaccgcc
caccgcaccttcgtcgccgtcgacggcggcatgagcgacaacccgcgcccggcgctgtac
ggggtgcggtacgagccccgcctggtcggccggagcaccacggccgaggccgcgcccgtg
accgtcgtggggcggcactgcgaggcgggcgacatcctggcgacggacgtgccgctgccg
ggggacgtacgaccgggggatctgctggccgtcccggtcgccggtgcgtaccacctgtcg
atggcctccggttacaacctcgtgggccgcccgccggtggtcgcggtggccgaaggacac
gccaggctgctggtccggcgggagtccctggaggacttccgcagcagggacgtgggcctg
taa
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