Streptomyces formicae: KY5_0967
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Entry
KY5_0967 CDS
T05416
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sfk
Streptomyces formicae
Pathway
sfk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KY5_0967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_0967
Enzymes [BR:
sfk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KY5_0967
DNA repair and recombination proteins [BR:
sfk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KY5_0967
Prokaryotic type
KY5_0967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATL25985
UniProt:
A0A291Q3C2
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All DBs
Position
1203937..1204614
Genome browser
AA seq
225 aa
AA seq
DB search
MAPRPLHEIVEPGWAKALEPVADRIAAMGDFLRAEIAAGRTYLPAGPNVLRAFQQPFDDV
RVLIVGQDPYPTPGHAVGLSFSVAPEVRPLPGSLINIYREMNTDLGLPQPSNGDLTPWTR
QGVLLLNRALTTAPRKPAAHRGKGWEEVTEQAIRALAARGKPLVSILWGRDARNLRPLLG
QLPSVESSHPSPMSADRGFFGSRPFSRANDLLVQQGAQPVDWRVP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccacgacccttgcatgaaatcgtcgaacccggctgggccaaggccctggaaccg
gtggccgatcggatcgccgcgatgggcgacttcctgcgcgcggagatcgccgccggacgc
acctatctcccggcgggaccgaacgtcctgcgcgccttccagcagcccttcgacgacgtc
cgcgtcctgatcgtcggccaggacccctatcccacgcccggtcacgcggtggggctgtcg
ttctcggtcgcgcccgaagtgcggccgctgcccggcagcctcatcaacatctaccgcgag
atgaacaccgacctgggcctgccccagccgtcgaacggcgacctcacgccctggacgcgg
cagggcgtgctgctgctcaacagggcgctgaccacggcgccgcgcaagcccgccgcgcac
cgcggcaagggctgggaggaggtcaccgagcaggcgatccgggcactcgccgcgcgcggc
aagccactggtgtcgatcctgtggggccgcgacgcccgcaatctgcggccgctgctcggg
cagttgccgtccgtcgagtcctcgcacccctcgccgatgtcggctgaccggggcttcttc
ggctcgcgccccttcagccgggccaacgatctgctggtccagcagggcgcgcagccggtg
gactggcgcgtgccgtga
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