Streptomyces formicae: KY5_1077c
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Entry
KY5_1077c CDS
T05416
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sfk
Streptomyces formicae
Pathway
sfk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KY5_1077c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_1077c
Enzymes [BR:
sfk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KY5_1077c
DNA repair and recombination proteins [BR:
sfk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KY5_1077c
Prokaryotic type
KY5_1077c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATL26095
UniProt:
A0A291Q3N1
LinkDB
All DBs
Position
complement(1332503..1333186)
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AA seq
227 aa
AA seq
DB search
MTDIAMLPASWRGVLGEELQKPYFKELTEFVEEERAKGPVFPPRDEVFAALDATPYDRVK
VLVLGQDPYHGEGQGHGLCFSVRPGVKTPPSLRNIYKEMKEELGHPVPDNGYLMPWAQQG
VLLLNAVLTVRSGEANSHKGKGWEKFTDAVIRAVAERPDPAVFVLWGNYAQKKLPLIDEE
KHVVVKGAHPSPLSAKKFFGSHPFTQIDAAVAAQGHEPIDWRIPDIG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacatcgccatgctgcccgcgtcctggcgcggagtcctcggcgaggagctgcag
aagccctacttcaaggagctcaccgagttcgtcgaggaggagcgggcgaagggccccgtc
ttccctccgcgtgacgaggtcttcgccgctctcgacgcgacgccgtacgaccgggtgaag
gtcctggtcctcggccaggacccgtaccacggcgagggccaggggcacggtctctgcttc
tccgtgcgccccggtgtgaagaccccgccctccctgcggaacatctacaaggagatgaag
gaggagctcggccaccccgtgccggacaacggctatctgatgccgtgggcccagcaaggc
gtcctgctcctgaacgcggtgctcacggtccgctccggagaggccaattcccacaagggc
aagggctgggagaagttcacggacgcggtgatccgcgcggtggccgagcggcccgacccg
gccgtcttcgtgctctgggggaactacgcgcagaagaagctccccctcatcgacgaggag
aagcacgtggtcgtgaagggcgcgcacccctcgccgctctccgcgaagaagttcttcggc
tcgcaccccttcacgcagatcgacgcggcggtggccgcgcaggggcacgagccgatcgac
tggcggatccccgacatcggctga
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