Streptomyces formicae: KY5_1432c
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Entry
KY5_1432c CDS
T05416
Name
(GenBank) putative helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
sfk
Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfk03019
]
KY5_1432c
Enzymes [BR:
sfk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KY5_1432c
Messenger RNA biogenesis [BR:
sfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KY5_1432c
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
SecA_DEAD
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ATL26450
UniProt:
A0A291Q3V7
LinkDB
All DBs
Position
complement(1775334..1778144)
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AA seq
936 aa
AA seq
DB search
MTEDLSPAERYAAARKRAVEQATALASFREMYEFGLDPFQIEACQALEAGKGVLVAAPTG
SGKTIVGEFAVHLALLQGKKCFYTTPIKALSNQKYADLAKRYGADKVGLLTGDNSVNSDA
PVVVMTTEVLRNMLYSGSQSLLNLGYVVMDEVHYLSDRFRGAVWEEVIIHLQESVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLFQHVLAGRRMYDLFEEGEGQKKAVNPD
LTRMARMEASRSYNPRDRRKGKMVREADRERERRQRSRIWTPGRPEVIERLDSEGLLPAI
TFIFSRAACEAAVQQCLYAGLRLNDDDARMRVREIVEERTGSIPNEDLHVLGYYEWLEGL
ERGIAAHHAGMLPSFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQ
HADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRAMSPEHLAGLAGTRTYPLRSSFKPSYN
MAVNLVDQFGRHRSRELLETSFAQFQADKSVVGISRQVQKNEEGLEGYKASMTCHLGDFD
AYARLRRELKDRETELAKQGAAQRRVAAAAALEKLKQGDVIHVPTGKYAGLALVLDPGLP
AGRVNGQRGFDHVDGPRPLVLTAERQVKRLAAMDFPVPVEALDRMRIPKSFNARSPQSRR
DLASALRTKAGHIVPDRHRKGRAAAADDQEIARLRTELRAHPCHGCDEREDHARWAERYH
RLKRDTSQLERRIEGRTNTIARTFDRIVALLTELDYLRGNEVTEHGKRLARLYGELDLLA
SECLRAGIWEGLNPAELAACVSALVYEARVGDDALAPKLPSGAAKAALGEMVRIWGRLDG
LEEDFKISQTEGVGQREPDLGFAWAAYMWANDKGLDEVLREAEMPAGDFVRWCKQVIDVL
GQIAAAAPRENSTVAKNARKAVDLLLRGVVAYSSVG
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggacctctcaccggccgagcggtacgcggcggcgcgcaagcgcgctgtcgag
caggccaccgcactcgcgtccttccgcgagatgtacgaattcggcctcgaccccttccag
atcgaggcctgccaggcgctcgaggcgggcaagggcgtgctcgtcgccgcccccacgggc
tcgggcaagacgatcgtcggcgaattcgccgtgcacctcgctctgctgcagggcaagaag
tgcttctacaccacgcccatcaaggcgctctccaaccagaagtacgccgacctcgccaag
cggtacggcgcggacaaggtcggcctgctgaccggcgacaacagcgtcaactccgatgcc
ccggtggtcgtcatgaccaccgaggtcctgcggaacatgctgtattcgggctcgcagtcg
ctgctcaacctcggctatgtggtcatggacgaggtgcactacctctccgaccgcttccgc
ggcgccgtctgggaggaagtgatcatccacctccaggagtcggtcacgctcgtctccctc
tcggcgacggtgtccaacgccgaggagttcggcgactggctcgacaccgtgcgcggcgac
accgaggtgatcgtctccgagcaccggcccgtgccgctcttccagcacgtgctcgccggg
cgtcggatgtacgacctcttcgaggagggcgagggccagaagaaggcggtcaaccccgac
ctcacgcgcatggcgcggatggaggccagccgttcgtacaacccgcgcgatcgccgcaag
ggcaagatggtccgcgaggccgaccgcgagcgcgagcgcagacagcgctcacggatctgg
acgccgggccgccccgaggtgatcgaacggctcgactccgagggcctgttgcccgccatc
acgttcatcttcagccgcgccgcctgcgaggccgccgtccagcagtgtctgtacgcgggc
ctcaggctgaacgacgacgacgcgcggatgagggtccgcgagatcgtcgaggagcgcacg
ggttcgatcccgaacgaggacctccacgtcctgggctactacgaatggctcgagggcctg
gagcgcggcatcgcggcgcaccacgcgggcatgctgcccagcttcaaggaggtcgtcgag
gagctcttcgtgcgcggcctggtcaaggccgtgttcgccaccgagacgctcgcgctcggc
atcaacatgcccgcgcgcagcgtggtcctcgaaaagctcgtcaagtggaacggcgagcag
cacgccgacatcaccccgggtgagtacacgcagttgacgggtcgtgcggggcgccggggc
atcgacgtcgagggccatgccgtggtcctgtggcagcgcgccatgagccccgagcacctc
gccgggctcgcgggcacgcgcacgtacccgctgcgctccagcttcaagccgtcgtacaac
atggcggtgaacctggtcgaccagttcgggcggcaccgctcgcgcgagctcctggagacg
tccttcgcgcagttccaggccgacaagtcggtcgtcgggatctcccggcaggtgcagaag
aacgaggagggtctggaaggctacaaggcctccatgacctgccacttgggggacttcgac
gcgtacgcgcgactgcgtcgcgaactcaaggaccgcgagaccgagctggccaagcagggc
gcagcccagcgcagggtcgccgctgccgccgccctggagaagctcaagcagggcgacgtc
atccacgtcccgacggggaagtacgcgggcctcgcgctcgtgctcgacccggggctgccc
gccgggcgggtcaacggccagcgcggcttcgaccacgtggacgggccgcgtcccctggtg
ctcaccgccgagcggcaggtcaagaggctcgcggcgatggacttcccggtgccggtcgag
gcgctggaccggatgcgcatcccgaagtcgttcaacgcgcgctcgccgcagtcccgccgt
gacctggcgtccgcgctgcgcaccaaggcggggcacatcgtccccgaccggcaccgcaag
gggcgtgcggcggccgccgacgaccaggagatcgcccgtctgcgcacggagctgcgcgcg
cacccgtgtcacggctgcgacgagcgcgaggaccacgcgcgctgggccgagcggtaccac
cgcctcaagcgcgacacctcgcagctcgagcggcgcatcgaggggcggacgaacaccatc
gcccgcaccttcgaccgcatcgtcgccctgctcaccgagctcgactacctgcggggcaac
gaggtcaccgagcacggcaagcggctcgcccggctctacggagagctggacctgctcgcc
agcgagtgcctgcgcgccgggatctgggaggggctcaaccccgccgaactggccgcgtgc
gtctcggcgttggtctatgaagcacgggtcggcgacgacgcgctcgcgcccaagctgccg
tccggcgcggcgaaggcggcgctcggcgagatggtgcggatctgggggcgtctcgacggt
ctggaggaagacttcaagatcagccagaccgagggcgtcggtcagcgcgagccggacctg
ggcttcgcctgggcggcgtacatgtgggccaacgacaaggggctcgacgaggtcctgcgc
gaggcggagatgccggcgggtgacttcgtgcggtggtgcaagcaggtcatcgacgtgctc
gggcagatcgcggcggcggcgccgcgcgagaacagtacggtcgcgaagaacgcgcgcaag
gcggttgatctgctgttgcgcggtgtggtggcgtacagctcggtcggctga
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