Streptomyces formicae: KY5_1875c
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Entry
KY5_1875c CDS
T05416
Name
(GenBank) Hypothetical ATP-binding protein UPF0042, contains P-loop
KO
K06958
RNase adapter protein RapZ
Organism
sfk
Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfk03019
]
KY5_1875c
Messenger RNA biogenesis [BR:
sfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KY5_1875c
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
Pilus_CpaD
DUF2380
Motif
Other DBs
NCBI-ProteinID:
ATL26893
UniProt:
A0A291Q5Y4
LinkDB
All DBs
Position
complement(2265497..2266432)
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AA seq
311 aa
AA seq
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MSEHDEGGEQVSTGMPSETPAVPDAAIPELVIISGMSGAGRSTAAKCLEDLGWFVVDNLP
PALIPTMVELGARSQGNVARIAVVVDVRGRRFFDNLRESLAELESKNVTRRIVFLESSDE
ALVRRFESVRRPHPLQGDGRIVDGIEAERDLLRELRGDADLVIDTSSLNVHELRAKMDAS
FAGEEEPELRATVMSFGFKYGLPVDADLVVDMRFLPNPHWVPELRQYTGQNEEVAAYVFN
QPGAKEFLDRYAELLQLIAAGYRREGKRYVTIAVGCTGGKHRSVAMSEKLAARLASEGVE
TVIVHRDMGRE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcacgacgaaggtggagagcaagtgagtacgggcatgcccagcgagacgccc
gcggtgccggacgcggcgatcccggagctggtgatcatctccggcatgtccggcgcgggc
cgcagcacggcggccaagtgcctggaggacctcggctggttcgtggtcgacaacctgccg
cccgcgctgatccccaccatggtggagctcggcgcccgctcgcagggcaacgtcgcccgc
atcgccgtggtcgtcgacgtccgcggcaggcgcttcttcgacaacctccgcgagtccctc
gccgagctggagtcgaagaacgtcacgcgccgcatcgtcttcctggagtcctccgacgag
gccctggtccgccgcttcgagtcggtgcgccgcccgcacccgctccagggcgacggacgc
atcgtcgacggcatcgaggccgagcgtgacctgctgcgcgagctgcgcggcgacgccgac
ctggtgatcgacacctccagcctgaacgtgcacgagctgcgcgccaagatggacgcctcc
ttcgcgggcgaggaggagcccgagctgcgggccaccgtcatgtccttcggcttcaagtac
ggcctgccggtcgacgccgacctggtcgtggacatgcgcttcctgcccaacccgcactgg
gtccccgagctgcgccagtacaccggccagaacgaggaggtggcggcgtacgtcttcaac
cagcccggcgccaaggagttcctcgaccggtacgccgagctgctccagctcatcgccgcg
ggctaccgccgcgagggcaagcggtacgtgacgatcgcggtcggctgcacgggcggcaag
caccgctcggtggccatgtcggagaagctcgcggcgcgcctcgcgtccgagggcgtggag
accgtcatcgtccaccgggacatggggcgcgagtga
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