KEGG   Streptomyces formicae: KY5_2892c
Entry
KY5_2892c         CDS       T05416                                 
Name
(GenBank) RecD-like DNA helicase YrrC
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
sfk  Streptomyces formicae
Pathway
sfk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sfk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    KY5_2892c
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfk03400]
    KY5_2892c
Enzymes [BR:sfk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     KY5_2892c
DNA repair and recombination proteins [BR:sfk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KY5_2892c
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 OB_YrrC UvrD_C_2 SH3_13 Viral_helicase1 HHH_5 AAA_11 AAA_22 Helicase_RecD PIF1 NPHP3_N AAA_16 PhoH TraI_hel_assoc_N DEAD nSTAND3 HTH_IclR SLFN-g3_helicase UvrD_C AAA HHH_2 UvrD-helicase ATPase_2 AAA_28 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ATL27910
UniProt: A0A291Q7Z1
LinkDB
Position
complement(3409716..3412001)
AA seq 761 aa
MSVLEGVLERITYANEETGYTVARVDTGRGAGDLLTVVGALLGAQAGESLRMQGRWGSHP
QYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDIIETEPER
LVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISVVKNE
PYRLAADVWGIGFLTADRIAQSVGIPHDSPERVKAGLQYALSQSTDQGNCFLPEERLIAD
AVKLLQVDTGLVIDCLAELAGEEEGVVRESVPGPDGGEDVTAVYLVPFHRAEISLAAQLS
RLLRTDEDRMPAFRDVAWDKALGWLAKRTGAELAPEQEEAVKLALTRKVAVLTGGPGCGK
SFTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELRPGGDAAYDKER
PLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRDMLADGSP
VPAVRLTRIFRQAQESGVVTNAHRINSGVPPLTQGMKDFFLFVEEETEDAGRVTVDVAAH
RIPKKFGLDPRRDVQVLAPMHRGPAGAGNLNGLLQQAITPARPDLPEKRFGGRVFRVGDK
VTQIRNNYEKGQNGVFNGTVGVVTSLSTDDQRLTVLTDEDEEIPYDFDELDELSHAYAVT
IHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVLVGSRKALGQAVRTVSAGK
RCTALDFRLSGRRGEGPGRFDRSNESQTSHSTSGTGAKGAG
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgtcggtgctcgagggggtcctcgagcgcatcacgtacgccaacgaagagaccgggtac
acggtcgcgcgcgtcgacaccggacgcggcgcgggcgatctgctcacggtcgtcggcgcg
ctgctcggcgcccaggccggggagtcgctgcggatgcagggccgctggggctcccacccg
cagtacggcaagcagttcaccgtggagaactacacgacggtgctgcccgccaccatccag
ggcatccgccgctatctcggctccggcctcatcaagggcatcggcccggtgatggccgac
cggatcaccacccacttcggcgtggacaccctcgacatcatcgagaccgagcccgagcgc
ctggtggaggtgccgggactcggccccaagcggacgaagatgatcgccgccgcctgggag
gagcagaaggccatcaaggaggtcatggtcttcctccagggagtcggcgtctccacctcc
atcgcggtgcgcatctacaagaagtacggcgacgcctcgatctccgtcgtgaagaacgag
ccctatcgcctcgccgccgacgtctggggcatcggcttcctcaccgccgaccgcatcgcc
cagtcggtcggcatcccgcacgacagcccggagcgcgtcaaggccggtctgcagtacgcc
ctttcgcaatccaccgaccagggcaactgcttcctgcccgaggagcgcctgatcgccgac
gcggtcaagctcctccaggtggacacgggcctggtcatcgactgcctcgccgaactggcg
ggcgaggaggagggggtcgtacgggagagcgtgccgggcccggacggcggcgaggacgtc
acggccgtctatctggtgcccttccaccgcgccgaaatctccctggccgcccagctgtcg
cgcctcctgaggaccgacgaggaccggatgcccgccttccgtgacgtcgcctgggacaag
gcactcggctggctcgcgaagcgcacgggagccgaactcgcgcccgagcaggaggaggcg
gtcaagctcgcgctgacccggaaggtggccgtcctgaccggcgggccgggctgcggcaag
tccttcacggtccgctccgtcgtcgagctggcccgcgccaagaaggccaaggtcgtcctc
gccgctcccaccggacgcgccgccaagcgcctcgccgagctgacgggcgccgaggcgtcc
accgtccaccgcctcctcgagctgcggccggggggagacgcggcgtacgacaaggagcgg
ccgctcgacgccgacctggtggtggtcgacgaagcctcgatgctggacctgctcctggcc
aacaagctggtcaaggcggtcccgccgggcgcccacctgctcttcgtcggcgatgtggac
caactgccgagcgtcggcgcgggcgaggtcctgcgggacatgctcgccgacggcagcccc
gtccccgccgtccgtctcacccgcatcttccggcaggcccaggagtcgggcgtggtcacc
aacgcccaccgcatcaactccggtgtgccgccgctcacccagggcatgaaggacttcttc
ctcttcgtcgaggaggagaccgaggacgcgggccgcgtcacggtggacgtcgccgcgcac
cgcatccccaagaagttcggcctcgacccgcgccgcgacgtccaggtcctcgcccccatg
caccgcggccccgcgggcgccgggaacctcaacggcctcctccagcaggccatcacgccc
gccaggcccgacctgccggagaagcgcttcggcggccgggtcttccgcgtcggcgacaag
gtcacccagatccgcaacaactacgagaaggggcagaacggcgtcttcaacggcacggtg
ggcgtggtcacctcgctcagcacggacgaccagaggctgaccgtcctgaccgacgaggac
gaggagatcccgtacgacttcgacgaactggacgagctctcgcacgcctacgccgtgacg
atccaccgctcccagggcagcgagtatccggcggtggtgatacccgtcaccacgggcgcg
tggatgatgctccagcgcaatctgctctacaccgcggtgacacgcgccaagaagctggtg
gtgctcgtcggttcgcgcaaggctctgggccaggcggtacgcacggtctccgcgggcaag
cgctgtacggccctggatttcaggctttcggggcgccgcggggagggccctggacgtttt
gatcgatcaaacgagtcgcaaacgtcacacagcacttccggaaccggggcgaagggggca
ggatga

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