Streptomyces formicae: KY5_3259
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Entry
KY5_3259 CDS
T05416
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sfk
Streptomyces formicae
Pathway
sfk00300
Lysine biosynthesis
sfk00470
D-Amino acid metabolism
sfk01100
Metabolic pathways
sfk01110
Biosynthesis of secondary metabolites
sfk01120
Microbial metabolism in diverse environments
sfk01230
Biosynthesis of amino acids
Module
sfk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KY5_3259
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KY5_3259
Enzymes [BR:
sfk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KY5_3259
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ATL28277
UniProt:
A0A291Q9V7
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All DBs
Position
3843556..3844938
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AA seq
460 aa
AA seq
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MGHDEEHDQEKTQDLRGSGDSATRRDQAVRAAVEQGVVGPAAPVVGLLDVTGIRAAAAEL
RAAFDAVVEPGTPVLHAFAVKAAPLVPVLRLLRSAGIGAEVASPGELGIARAAGIAPSDT
VLDSPAKTPAELRQALALGIAVNADNPQELARIDTLVQSAPTGSPVGLRINPQIGGGSIG
AVSTATATSKFGVPLCDPGARDWLLQAYLDRPWLTRLHAHSGSQGMTLEMMVRGVTATYE
LAEEINERAGRRQIDTIDIGGGLPVNFSSDEVSPTHAQYARRLKARVPGLLDGRYGLVTE
FGRSLLAKQGTLLARVEYVKKAGGRPIALTHAGVQVATRTVYAPASWPLRIAAYDPKGRP
RTGPAVGQDVAGPACFAGDLLAENRPLPLLEQGDYVAALDTGAYYFAHHYSYNSLARPGI
YGFSSYADEVRFAAVREPQTLDEIVAEAGGGAERDALRHL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggccacgacgaggaacacgaccaggaaaagactcaggacctgcgcgggagcggcgac
agcgccacccgccgcgaccaggccgtccgcgccgccgtcgaacagggcgtcgtggggccc
gccgcccccgtcgtcggcctcctcgacgtcaccggcatccgcgcggccgccgccgagctg
cgcgccgccttcgacgccgtcgtcgagcccggcacccccgtcctgcacgccttcgcggtc
aaggccgccccgctggtccccgtgctcaggctgctgcgctcggcgggcatcggcgccgag
gtggcgagccccggcgagctcggcatcgccagggccgcgggcatcgcgccctcggacacc
gtcctcgactcccccgccaagacccccgccgaactgcgccaggccctcgcgctcggcatc
gccgtgaacgcggacaacccgcaggagctggcccgcatcgacacgctcgtccagtcggcg
ccgaccggatcgcccgtcggcctgcggatcaacccgcagatcggcggcggctcgatcggc
gcggtgtcgacggcgacggccacctccaagttcggggtgccgctctgcgaccccggcgcc
cgcgactggctgctccaggcctacctcgaccggccgtggctgacccgcctgcacgcgcac
tccgggtcgcagggcatgaccctcgaaatgatggtgcggggcgtcaccgcgacgtacgaa
ctggccgaggagatcaacgaacgcgccgggcgacgccagatcgacaccatcgacatcggc
ggcggactccccgtcaacttctcctcggacgaggtgagtccgacccacgcgcagtacgcg
cgccgcctcaaggcccgcgtgccgggactgctcgacggtcgctacggactggtcaccgag
ttcggccgctcgctgctcgccaagcagggcacgctcctcgcccgcgtcgagtacgtgaag
aaggcgggcggccgcccgatcgcgctgacgcacgcgggcgtgcaggtggcgacgcggacc
gtgtacgcgcccgcgtcgtggccgctgcggatcgccgcctacgacccgaagggcaggccg
aggaccggtcccgccgtcggccaggacgtggcgggcccggcctgcttcgcgggcgacctg
ctcgccgagaaccgcccgctgcccctgctcgaacagggcgactacgtagcggcgttggac
accggcgcctactacttcgcgcaccactactcgtacaacagcctggccaggcccgggatc
tacggcttctcgtcgtacgccgacgaggtgcgcttcgccgcggtgcgcgagccgcagacg
ctcgacgagatcgtggcggaggcgggcggcggcgcggagcgggacgcgctgcgccacctc
tga
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