Streptomyces formicae: KY5_3639c
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Entry
KY5_3639c CDS
T05416
Name
(GenBank) DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sfk
Streptomyces formicae
Pathway
sfk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KY5_3639c
09124 Replication and repair
03420 Nucleotide excision repair
KY5_3639c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfk03021
]
KY5_3639c
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_3639c
Enzymes [BR:
sfk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KY5_3639c
Transcription machinery [BR:
sfk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KY5_3639c
DNA repair and recombination proteins [BR:
sfk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KY5_3639c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
Motif
Other DBs
NCBI-ProteinID:
ATL28657
UniProt:
A0A291QB03
LinkDB
All DBs
Position
complement(4331905..4333548)
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQADACRRVIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVEFSRYPVPHALLVDIAETMARYGRLTLSKHPTHGLVLTTTDRPVLEEILR
SKKVQPLVGERVDPDTVVVHPSERGQVKQTLLKLGWPAEDLAGYVDGEAHKIDLDESGWS
LRPYQQQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGIYPHLELFDSRDWGLVIYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEAEEKYRFCATTATKRKVTEALVKKHAGEQTLVIGQYIDQ
LDELGEHLGAPVIKGETTNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIMDA
DELLAGG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggtcccctcattgtccagtcggacaagaccctcctgctcgaggtcgaccacgag
caggccgatgcctgccgacgtgtcatcgcgcccttcgcggagctggagcgtgctcccgag
cacattcatacctatcgcgtgacgccgctcgggctgtggaatgcgcgggccgccgggcac
gacgccgagcaggtcgtggacgcgctcgtggagttctcgcggtatcccgtgccgcacgcg
ctgctcgtcgacatcgccgagacgatggcgcgctacgggcggctcacgctctccaagcac
cccacccacgggctcgtcctcaccaccaccgaccggcccgtgctcgaagagatcctgcgg
tcgaagaaggtccagccgctggtcggggagcgggtcgacccggacaccgtcgtcgtgcac
ccctctgagcgcgggcaggtcaagcagaccctgctcaagctgggctggcccgccgaggac
ctcgcggggtacgtcgacggcgaggcccacaagatcgatcttgacgagagcggctggtcg
ctgcggccctatcagcagcaggccgtcgaggggttctggcacggtggcagcggtgtcgtc
gtgctgccctgtggggcgggcaagacgctggtgggcgcgggggccatggcgcaggccaag
gccaccaccctcatcctcgtcaccaacaccgtctccgcccgccagtggaagcacgagctg
gtgaagcgcacctcgctgaccgaggacgagatcggcgagtacagcgggaccaggaaggag
atccggcccgtcaccatcgccacgtaccaggtgctcacgaccaagcggaagggcatctat
ccgcacctcgagctcttcgactcgcgcgactgggggctcgtgatctacgacgaggtgcac
ctgctgcccgcgcccgtcttcaagttcaccgccgacctccaggcgcgccgccgtctcggg
ctcaccgccaccctcgtacgcgaggacgggcgcgagtccgacgtcttctcgctcatcggg
cccaagcgcttcgacgccccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtggaggtgcgggtcaacctcaccgacagcgagcgactcgcgtacgccaccgcc
gaggccgaggagaagtaccggttctgcgccaccacggcgacgaagaggaaggtgacggag
gcgctggtcaagaagcacgcaggtgagcagaccctcgtcatcgggcagtacatcgaccag
ctcgacgagctgggcgagcacctgggcgcgcccgtcatcaagggcgagacgaccaacgcg
cagcgcgagaagctcttcgacgccttccgggagggcgagatctccgtcctcgtcgtctcc
aaggtcgccaacttctccatcgacctgccggaggccaccgtcgccatccaggtgtcgggc
acgttcggctcgcggcaggaggaggcccagcggctcgggcgcgtgctgcggcccaaggcg
gacggccacgaggcccgcttctactccgtcgtcgcccgcgacaccatcgaccaggacttc
gccgcccaccgccagcggttcctcgccgagcaggggtacgcgtaccggatcatggacgcg
gacgagctgctggccgggggctga
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