Streptomyces formicae: KY5_4824
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Entry
KY5_4824 CDS
T05416
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sfk
Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfk03016
]
KY5_4824
Enzymes [BR:
sfk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KY5_4824
Transfer RNA biogenesis [BR:
sfk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KY5_4824
Prokaryotic type
KY5_4824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DEC1
Motif
Other DBs
NCBI-ProteinID:
ATL29842
UniProt:
A0A291QDZ6
LinkDB
All DBs
Position
5613598..5614452
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AA seq
284 aa
AA seq
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MSDEVEPGFVRVRLDLSYDGKDFSGWAKQKQGQRTVQGEIESALRTVTRSQETYELTVAG
RTDSGVHARGQVAHVDLPESVWAEHSDKLLRRLSGRLPHDVRVWKVAEAPAGFNARFAAV
WRRYAYRVTDHPGGVDPLLRSHVLWHDWELDLDAMNAAAETLLGEHDFAAYCKKREGATT
IRTLQQLHWVRRDDGILEATVRADAFCHNMVRSLVGAMLFVGDGHRPVEWPAKVLAAGVR
DSAVHVVRPHGLTLEEVGYPADELLAARSKEARNKRTLPGAGCC
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatgaggtagagcccgggttcgtgcgggtgcggctggacctttcgtacgacgga
aaggacttctccggctgggccaagcagaagcaggggcagcggaccgtccagggcgagatc
gagagcgcgctgcggaccgtgacccggtcgcaggagacgtacgagctgaccgtcgcgggg
cgcaccgacagcggggtgcacgccagggggcaggtcgcccacgtcgatctgccggagagc
gtgtgggccgagcacagtgacaagctgctgcgcaggctttcggggcggctgccgcacgac
gtgcgggtgtggaaggtggccgaggcgcccgccgggttcaacgcgcggttcgcggccgtg
tggcggcgctacgcctatcgcgtgaccgaccacccgggcggtgtcgacccgctgttgcgc
tcccatgtgctgtggcacgactgggagttggacctcgacgccatgaacgcggccgccgag
acgctcctcggggagcacgacttcgcggcgtactgcaagaagcgcgagggcgccacgacc
attcggacgttgcagcaactgcactgggtgcgacgggacgacgggatcctcgaagcgacc
gtgcgggccgacgcgttctgccacaacatggtgcgctcgctggtgggcgccatgctgttc
gtgggggacgggcaccggcccgtggagtggcccgcgaaggtgctcgcggccggggtgcgg
gactccgcggtgcacgtcgtgcggccgcacgggctcacgctcgaagaagtcggctacccc
gccgacgagttgctcgccgcgcgcagcaaggaggcgcgcaacaagcggacgctgcccggg
gccgggtgctgctga
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