Streptomyces formicae: KY5_5177c
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Entry
KY5_5177c CDS
T05416
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sfk
Streptomyces formicae
Pathway
sfk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KY5_5177c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_5177c
Enzymes [BR:
sfk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KY5_5177c
DNA repair and recombination proteins [BR:
sfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KY5_5177c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
HTH_32
Motif
Other DBs
NCBI-ProteinID:
ATL30195
UniProt:
A0A291QFH6
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Position
complement(5984077..5985294)
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AA seq
405 aa
AA seq
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MALNTSADTPLPVGEVSRLIGGWIDRLGAIWVEGQITQLSRRPGAGVVFMTLRDPSHDIS
VSVTCYRQVFDAVADVVSEGARVVVHAKPEWYAPRGQLSLRAAEIKPVGVGELLARIEQL
KKSLAAEGLFAPERKKTLPFLPQLIGLVTGRASAAERDVLENARHRWPAVRFEVRNVPVQ
GVHAVPQVVQAVQDLDALDAVDVIIVARGGGSVEDLLPFSDEQLVRAVASCRTPVVSAIG
HEPDNPLLDHVADLRASTPTDAAKKVVPDVGEEYERVRWLRDRARRSVDAYLDREERGLA
HALARPSMEHPHRMIEEREEQVAALVDRSRRTLGHLLDRAGSELTHTHARVVALSPAATL
QRGYAVLQKTDGSVVRDPEEVGADEELRARVAGGEFTVRTTQDDI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaacacgtccgcggacaccccgctacccgtcggggaggtgtcacgcctcatc
ggcggctggatcgaccggctcggtgccatctgggtcgaggggcagatcacgcagctgtcc
cgcaggccgggcgcgggcgtcgtcttcatgacgctgcgcgacccgtcgcacgacatctcg
gtgagcgtgacctgttaccgccaggtgttcgacgccgtggcggacgtcgtctccgagggc
gcgcgcgtcgtggtgcacgccaagcccgagtggtacgcgccgcgtggccagctctccctg
cgggccgcggagataaagccggtcggcgtcggtgaactgctcgcgcggatcgagcagttg
aagaagagcctggcagccgaggggctcttcgcgcccgagcgcaagaagacgctgcccttc
ctgccgcagctcatcgggctcgtcacgggccgcgcgtcggccgccgagcgcgacgttttg
gagaacgcgcgccaccgctggcccgccgtccgcttcgaggtgcgcaacgtgcccgtccag
ggcgtgcacgcggtgccgcaggtcgtccaggccgtgcaggacctcgacgcgctcgacgcg
gtcgacgtgatcatcgtggcgcggggcggcggcagcgtggaggacctgctgccgttctcg
gacgagcagctggtgcgggcggtggcgtcctgtcgtacgcccgtcgtgtcggcgatcggc
cacgaaccggacaaccccctgctcgaccacgtggccgacctgcgcgcctccacgccgacc
gacgcggccaagaaggtcgtgccggacgtcggcgaggagtacgagcgcgtgcggtggctg
cgggaccgcgcgcggcgcagcgtggacgcctacctcgaccgcgaggagcgcggcctcgcg
cacgccctggccaggccctcgatggagcatccgcaccggatgatcgaggagcgcgaggag
caggtggccgcgctcgtcgaccgcagccgccgcacgctcgggcacctcctggaccgggcg
ggctccgagctgacgcacacccacgcgcgcgtggtggccctctcccccgccgcgaccctc
cagcgggggtacgcggtgctgcagaagacggacggctccgtggtccgcgaccccgaagag
gtgggcgccgacgaggagttgcgggcccgcgtcgccgggggcgaattcaccgtacgaacc
acacaggacgacatttag
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