Streptomyces formicae: KY5_5308
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Entry
KY5_5308 CDS
T05416
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfk
Streptomyces formicae
Pathway
sfk03420
Nucleotide excision repair
sfk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KY5_5308
03430 Mismatch repair
KY5_5308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_5308
Enzymes [BR:
sfk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KY5_5308
DNA repair and recombination proteins [BR:
sfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KY5_5308
MMR (mismatch excision repair)
Other MMR factors
KY5_5308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
Zn_ribbon_TiaS
Zn_ribbon_SprT
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ATL30326
UniProt:
A0A291QFN6
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All DBs
Position
6140480..6142690
Genome browser
AA seq
736 aa
AA seq
DB search
MTSVTHSTLFPQVPDSADAVLAGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPASVLAVTFTARAAGEMRGRLRQLGASGVQARTFHSAALRQLQFFWPKAVGGS
LPRIVDRKIKLVADAAAACRIRLDRNELRDLTSEIEWSKVTQTVPADYAAAAAKSGRDVP
RDPAEISQLYAAYEDLKRDRAVIDFEDVLLLTVGILQDRHDIAEQIRSQYQHFVVDEYQD
VSPLQQRLLELWLGERDSLCVVGDASQTIYSFTGATPDHLLNFRTRHPGATVVKLVRDYR
STPQVVHLANGLLSQARGRAADHRLELISQRDPGAEPVYVEYADEPAEAEGAARRIRALL
ADGVPASEIAVLFRTNSQSEIYEQALADAGVPYQLRGAERFFERTEVREAGAALRGAARF
GGNDALLDDVVDLPSQVRAVLSTKGWTNQPPAGSGAARDRWESLAALVRLAEDFARAKPE
ATLADLVAELDERANAQHAPTVEGVTLASLHAAKGLEWDAVFLVGLAEGMMPITYAKTDE
QIEEERRLLYVGVTRARVHLSLSWALSRSPGGRPNRRPSRFMDGLRPGSGAGAAARAAGG
GPGGVERGSGGEGTGALAGRRQRKSRTPARCRVCGRTLTEAGEMKLMRCEDCPSDMDEGL
YERLREWRSEQASRLGQPAYCVFTDKTLIAIAEAVPDDEGELARIPGVGVRKFHRFGADV
LAICAGQDCVRGADEE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcagtaacgcactccactctcttcccgcaggtcccggactctgccgacgcggtg
ctcgccgggctcgacccggagcagcgcgaggtggccaccgccctgcacgggccggtgtgc
gtcctcgcgggtgccgggacgggcaagacacgggcgatcacccaccggatcgcctacggc
gtgcgcgccgggatcctccagcccgccagcgtcctggccgtcacgttcaccgcccgcgcg
gcgggcgagatgcgcggccgactgcgccagctcggcgcctccggcgtccaggcgcgcacg
ttccactcggcggccctgcgtcagctccagttcttctggccgaaagcggtcggcggctcg
ctgccccgcatcgtcgaccgcaagatcaagctcgtcgcggacgcggccgccgcctgccgc
atccggctcgaccgcaatgagctgcgcgacctgaccagcgagatcgagtggtccaaggtc
acccagaccgtcccggcggactatgccgcggccgccgccaagtccggccgtgacgtcccg
cgcgacccggccgagatctcccagctctacgcggcgtacgaggacctcaagcgcgaccgc
gccgtcatcgacttcgaggacgtcctgctgctcaccgtcggcatcctccaggaccggcac
gacatcgccgagcagatccgctcccagtaccagcacttcgtggtcgacgagtaccaggac
gtcagccccctccagcagcgcctcctcgagctgtggctcggcgagcgcgacagcctctgc
gtcgtcggcgacgccagccagacgatctactccttcaccggcgcgacccccgaccacctg
ctgaacttccgcacccgccacccgggagcgaccgtcgtcaagctggtccgtgactaccgc
tccacgccccaggtcgtccacctggccaacggcctgctctcccaggcccgcggccgcgcc
gccgaccaccgcctggagctgatctcccagcgcgaccccggggccgagccggtctacgtc
gagtacgcggacgagcccgccgaggcggaaggcgcggcccgccgcatccgcgccctcctc
gccgacggcgtcccggccagcgagatcgcggtcctcttccgtacgaactcgcagtcggag
atctacgaacaggcgctcgccgacgcgggggtgccctatcagctgcgcggcgccgagcgg
ttcttcgagcgcaccgaggtgcgggaggcgggcgcggccctgcgcggcgcggcccgcttc
gggggcaacgacgccctcctggacgacgtggtcgacctgccctcccaggtccgggccgtg
ctctccaccaagggctggacgaaccagcccccggcgggctccggggcggccagggaccgg
tgggagtccctcgcggcgctcgtgcgcctcgcggaggacttcgcgcgggccaagccggag
gcgaccctcgccgacctcgtggcagagctcgacgagcgggcgaacgctcagcacgcgccc
accgtcgagggcgtcacgctggcctcgctgcacgcggccaagggcctggagtgggacgcc
gtgttcctggtcggcctcgccgagggcatgatgccgatcacctatgccaagaccgacgag
cagatcgaggaggagcgcaggctcctgtacgtcggcgtgacccgcgcccgcgtccacctc
tccctctcctgggccctctcccgttcccccggcggccgtccgaaccgccgtcccagccgc
ttcatggacggcctgcgcccgggctcgggggcgggtgcggcggcgcgtgccgcgggcggt
ggtcccgggggcgtcgagcgcggcagcggcggcgagggcaccggagccctcgcgggccgt
cggcagcgcaagagccgcacgcccgcccgctgccgggtctgtgggcggacgctgaccgag
gcgggcgagatgaagctcatgcggtgcgaagactgtccttccgacatggacgaaggactc
tacgagcggctgcgggagtggcgatcggagcaggcgagccgcctgggacagcccgcgtac
tgcgtcttcacggacaaaaccttgatcgccatcgcggaggccgtgccggacgacgagggc
gagctggcccggatcccgggagtcggcgtccgtaagttccaccgcttcggagccgacgtc
ctcgctatttgcgcaggtcaggactgtgtaaggggcgccgatgaagaatga
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