Streptomyces formicae: KY5_5471
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Entry
KY5_5471 CDS
T05416
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sfk
Streptomyces formicae
Pathway
sfk00300
Lysine biosynthesis
sfk00470
D-Amino acid metabolism
sfk01100
Metabolic pathways
sfk01110
Biosynthesis of secondary metabolites
sfk01120
Microbial metabolism in diverse environments
sfk01230
Biosynthesis of amino acids
Module
sfk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KY5_5471
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KY5_5471
Enzymes [BR:
sfk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KY5_5471
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NBD_C
Motif
Other DBs
NCBI-ProteinID:
ATL30489
UniProt:
A0A291QFJ8
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All DBs
Position
6315915..6317306
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYAAPPTDLNALDAKVWSRTVTRTAEGVVRMGGIDVTRLAE
EFGTPAYFIDEADFRARCRAWRDAFGGDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGG
ELATALAAGMPAERIAFHGNNKTVDEIERAVEAGVGRIVLDSFQEIVRVAHIAERLGKRQ
RVQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALKLDGLELIGIHSHIGS
QIFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAAALN
EIVGRECAAAQLSTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIR
TALYDAEYTVALVSRSSDAEPVLVRVVGKHCESGDIVVRDAFLPADLAPGDLIAVPATGA
YCRSMASNYNHALRPPVVAVDDGAARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgatccgcacaccccgccgggccccgccacgcagacgtcctgcccgagggtcac
tacgccgcaccgccgaccgacctcaacgccctcgacgccaaggtctggtcccgcaccgtc
acccgtaccgccgaaggcgtcgtccgcatgggcggcatcgacgtgacgcggctcgccgag
gagttcggcacgcccgcgtacttcatcgacgaggcagacttccgcgcgcgctgccgcgcc
tggcgcgacgcgttcggcggtgacgccgacgtcttctacgcgggcaaggcgttcctctcc
cgcgccgtcgtgcgctggctgcacgaggaggggctgaacctggacgtgtgcagcggcggc
gagctggccaccgcgctcgccgcggggatgcccgccgagcgcatcgccttccacggcaac
aacaagaccgtggacgagatcgagcgggccgtcgaggccggcgtcgggcggatcgtgctc
gactccttccaggagatcgtgcgcgtcgcgcacatcgccgagcgcctcggcaagcgccag
cgcgtgcagatccgcgtgaccgtgggcgtcgaggcgcacacccacgagttcatcgccacg
gcgcacgaggaccagaagttcgggatcgcgctggccgggggacaggccgccgaggccgtg
cggcgggcgctcaagctcgacgggctcgaactgatcgggatccacagccacatcgggtcg
cagatcttcgacatggccggattcgaggtcagcgcccgccgcgtcgtccagctgctcgcc
gaggtgcgtgacgagcatggcgtggagctgcccgagatcgacctcggcggtggcctcggc
atcgcgtacacctccgacgacgacccgcgcgagccgcacgagatcgccgcggcgctgaac
gagatcgtcggacgcgagtgcgccgccgcgcagctcagcacgccccgcatctccgtcgag
ccgggccgcgccatcgtcggcccgaccgccttcacgctctacgaggtcggcacgatcaag
ccgctcgacgggctgcgtacgtacgtctccgtggacggcggcatgtcggacaacatccgc
accgcgctctacgacgccgagtacacggtcgccctcgtctcccgctcctccgacgccgag
ccggtcctggtgagggtggtcggcaagcactgtgagagtggtgacatcgtcgtacgggac
gctttcctgcccgccgacctcgcgcccggcgatctgatcgcggtgcccgcgaccggcgcg
tactgccgatcgatggcgagcaactacaaccacgctcttcgcccgcccgtcgtggccgtc
gacgacggtgcggcgcgggtgatcgtccggcgcgagacggaggaagatctcctgcgtctc
gacgtcggatga
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