Streptomyces formicae: KY5_5623c
Help
Entry
KY5_5623c CDS
T05416
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sfk
Streptomyces formicae
Pathway
sfk00260
Glycine, serine and threonine metabolism
sfk00460
Cyanoamino acid metabolism
sfk00630
Glyoxylate and dicarboxylate metabolism
sfk00670
One carbon pool by folate
sfk00680
Methane metabolism
sfk01100
Metabolic pathways
sfk01110
Biosynthesis of secondary metabolites
sfk01120
Microbial metabolism in diverse environments
sfk01200
Carbon metabolism
sfk01230
Biosynthesis of amino acids
sfk01240
Biosynthesis of cofactors
sfk04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KY5_5623c
09102 Energy metabolism
00680 Methane metabolism
KY5_5623c
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KY5_5623c
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KY5_5623c
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KY5_5623c
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KY5_5623c
Enzymes [BR:
sfk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KY5_5623c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ATL30641
UniProt:
A0A291QG22
LinkDB
All DBs
Position
complement(6501498..6502760)
Genome browser
AA seq
420 aa
AA seq
DB search
MSLLNTPLHELDPDVAAAVDAELHRQQSTLEMIASENFAPVAVMEAQGTVLTNKYAEGYP
GRRYYGGCEHVDVAEQIAIDRVKDLFGAEYANVQPHSGASANQAALFAIAQPGDTILGLD
LAHGGHLTHGMRLNFSGKQFNVVAYHVDEAGLVDMAEVERLAKENSPKVIIAGWSAYPRQ
LDFAEFRRIADEVGAKLWVDMAHFAGLVAAGLHPNPVPYADVVTSTTHKTLGGPRGGIIL
ARNKDFAKKLNSAVFPGFQGGPLEHVIAAKAVSFKVAASEEFKERQQRTLEGARILAERL
VQDDAKAVGVGVASGGTDVHLVLVDLRDSELDGQQAEDRLHEVGITVNRNAVPNDPRPPM
VTSGLRIGTPALATRGFDADDFREVADVIAEALKPGFDAEALKARVTALADKHPLYPGLK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttctcaacacccctctccacgagctcgaccccgacgtcgccgccgccgtcgac
gccgagctccaccgccagcagtccaccctggaaatgatcgcctcggagaacttcgctccg
gtcgccgtcatggaggcccagggaacggtcctcaccaacaagtacgccgagggctacccc
ggccgccgctactacggcggctgcgagcacgtcgacgtcgccgagcagatcgcgatcgac
cgggtcaaggacctgttcggcgccgagtacgccaacgtccagccgcactccggcgcctcc
gccaaccaggccgccctcttcgcgatcgcccagcccggcgacacgatcctcggcctggac
ctggcgcacggcggccacctcacccacggcatgcgcctgaacttctccggcaagcagttc
aacgtggtcgcgtaccacgtggacgaggccggtctggtcgacatggccgaggtcgagcgc
ctggccaaggagaacagccccaaggtgatcatcgcgggctggtccgcctacccgcgccag
ctggacttcgcggagttccgccggatcgccgacgaggtcggcgcgaagctgtgggtcgac
atggcgcacttcgcggggctcgtcgccgcgggtctgcaccccaacccggtgccgtacgcg
gacgtggtcacctccaccacgcacaagaccctgggcggcccgcgcggcggcatcatcctg
gcccgcaacaaggacttcgcgaagaagctgaactccgcggtcttccccggcttccagggc
ggcccgctggagcacgtgatcgccgcgaaggccgtctccttcaaggtcgcggcctccgag
gagttcaaggagcgccagcagcgcacgctggaaggcgcccgcatcctggccgagcgcctg
gtgcaggacgacgcgaaggccgtcggcgtcggcgtggcctccggcggcacggacgtgcac
ctggtcctggtggacctgcgcgactccgagctcgacggccagcaggccgaggaccgcctc
cacgaggtcggcatcacggtcaaccgcaacgccgtcccgaacgacccgcgtcccccgatg
gtcacgtcgggcctgcggatcggcacgcccgcgctcgccacgcgcggcttcgacgccgac
gacttccgcgaggtcgccgacgtcatcgccgaggccctcaagccgggcttcgacgcggag
gccctcaaggcccgggtgaccgctctggccgacaagcacccgctgtaccccggcctgaag
tag
DBGET
integrated database retrieval system