Streptomyces formicae: KY5_5733
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Entry
KY5_5733 CDS
T05416
Name
(GenBank) Integration host factor beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
sfk
Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfk03032
]
KY5_5733
03036 Chromosome and associated proteins [BR:
sfk03036
]
KY5_5733
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_5733
DNA replication proteins [BR:
sfk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KY5_5733
Chromosome and associated proteins [BR:
sfk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KY5_5733
DNA repair and recombination proteins [BR:
sfk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KY5_5733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
ATL30751
UniProt:
A0A291QGC7
LinkDB
All DBs
Position
6631665..6632366
Genome browser
AA seq
233 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAVVRAVVSGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLTGGASATVKKA
AAKKASTAKKATATATKAAAKKTTAKKSAAKKTTATAKKAAAKKATAKKTATKATAKKAT
ATAKKTTAKKAAPAKKATAKKTAPAKKATAKKAPAKKSTARKTTAKKATARKK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggaggccgccagcaggcc
gccgacgccgtggacgcggtcctggacgccgtcgtccgtgccgtggtcagcggagaccgt
gtttcggtcaccggcttcggctcgttcgagaaggtcgaccgcccggcccgctacgcccgc
aacccccagaccggggagcgcgtgcgcgtcaagaagacctcggttccgcggttccgcgcg
ggccagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacgtcgcg
gtcaagaaggcccccaagggcagcctgaccggcggtgcttcggcgaccgtcaagaaggcc
gctgccaagaaggccagcaccgccaagaaggccacggcgacggcgacgaaggccgctgcc
aagaagaccaccgccaagaagtccgccgcgaagaagaccacggcgacggcgaagaaggcg
gccgcgaagaaggccaccgccaagaagacggcgacgaaggccacggccaagaaggccacg
gcgacggcgaagaagaccaccgccaagaaggccgcgcccgcgaagaaggccaccgccaag
aagacggcgcccgccaagaaggccacggccaagaaggcgcccgccaagaagtccacggcg
cgcaagacgaccgccaagaaggccacggcccgcaagaagtaa
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integrated database retrieval system
