Streptomyces formicae: KY5_5753
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Entry
KY5_5753 CDS
T05416
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sfk
Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfk03019
]
KY5_5753
03009 Ribosome biogenesis [BR:
sfk03009
]
KY5_5753
03036 Chromosome and associated proteins [BR:
sfk03036
]
KY5_5753
Enzymes [BR:
sfk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KY5_5753
Messenger RNA biogenesis [BR:
sfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KY5_5753
Ribosome biogenesis [BR:
sfk03009
]
Eukaryotic type
90S particles
RNase
KY5_5753
Prokaryotic type
rRNA processing factors
KY5_5753
Chromosome and associated proteins [BR:
sfk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KY5_5753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ATL30771
UniProt:
A0A291QGE3
LinkDB
All DBs
Position
6652531..6653352
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AA seq
273 aa
AA seq
DB search
MRGTVSSPKKAEDAKKLAETTASSHTLLEGRLGYKLESALLVRALTHRSYAYENGGLPTN
ERLEFLGDSVLGLVVTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVSRGLELGSFIRLG
RGEEGTGGRDKASILADTLEAVIGAVYLDQGLDAAGELVHRLFDPLIEKSSNLGAGLDWK
TSLQELTAMESLGVPEYLVTESGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESA
WRAIRAAADERLKVAEAAAAAAQSEGTADTPSA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgagaggcaccgtgtctagccccaagaaggcggaagacgccaagaaattggcggagaca
acggcctcgtcccacacgcttctggaagggcggctcgggtacaagctcgagtccgccctt
ctggtgcgtgcgctgacccaccgttcgtacgcgtacgagaacggcggtctgccgacgaac
gagcgcctcgagttcctcggggactccgtgctcggtctcgtcgtcacggacacgctgtac
cgaacccaccccgacctgcccgaaggccagctggccaagttgcgggccgcggtggtcaat
tcgcgtgcgctggcggaggtcagccgcggcctcgaactcggctccttcatccggctcggc
cggggcgaagagggcacgggaggccgggacaaggcatccatcctcgccgacaccctcgaa
gcggtgatcggcgcggtctatctggaccagggtctggacgcggcgggtgagctggtgcac
cggctcttcgacccgctgatcgaaaagtcctcgaacctgggcgcgggcctggactggaag
accagtcttcaggagctcaccgcgatggagagcctcggcgtgcccgagtacctcgtcacg
gagagcggcccggaccacgagaagacctttactgctgccgcccgcgtcggaggcgtctcg
tacggcaccggcaccggccgcagcaagaaggaagcggagcagcaggccgcggagtccgcg
tggcgcgcgattcgcgccgcggcggacgagcggctgaaggtggcggaagccgccgccgct
gctgcgcagtccgaggggaccgccgacaccccctcggcctga
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